Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00706 ATGATAATGGTTTTCATTCTTAATGAAGAAACCAGTGCTCTTGACTCTGAATCAGAATCACTTGTCCAGATTGCCCTTGATCAGGCCTCCATGGGAAGAACCACACTGGTAGGTACAGAACTAATGTTGTTGCCCACCAGTTCTCTAACAGACCTCGTAGAAGTTGTCAATGGTGGCTGCATCGATGAAATTGTAGCAAGAAGCAGTGCAGGTCAACTAAGCACCGGCAAATCAAGCCCAGCCATTTTTCCAAAGTCATCATTGCCTGATGATGTTACTCCACCTCCAGTGTCTCACCACTCATCTTCTTTTCCTcggtttctctctctaaatgcTCCTGAATGGAAACAAGACCGTGTCTCTTTATTAGTTAAAACCACCTCTGCAGTGACAATTGTAATGATTATAGGGCTTGTCGCTCAAAATGATAGCACACAGATTGCAGTGGAAGCAGTGTGCAATCTCAGAACAGTAACTTCATTTGGAAGCATCGGAAAAGTTTTACAAGTATTTGATGAGGCTCAAGAGGCAACAAGAAGGGAAGCAAGGAAGAAGTCATGGCTAGCTGGTATTGGAATGGGTTCTGCTCAGTTGCTAAGTTTCATGTTATGGGCTTTTGAATTCTGCCGAGGCAGGAAGCATGGTTCTGACCTTGCCAAGAGCTCAACTGCAGTAGCATctgtatttaaaattcttgACAGGAAATCACTAATCCCTAATCCTAAGGGTGGAGATGGCAACAACGGTTTGAAGTTGGAAAAGATTAGTGGGAAGATAGAGATGGAGAACGTTGATTTTACTTATCCAGGCAGACCAGAGAACCCAATACTGTGCAATTTCAGCTTGGAGGTGAAGGCAGGAAAGCAGCAGACAGCACTAGTTAGCCAAGAGCCAGTGATATACTCTGGCACCATACGTGACAACATTTTGTTTGGGAAACCTGAGCCAACAGAGAAAGAGATGGTGGCTGCTAGAGCTGCAAATGCTCATGAGTTCATCTTATCGCTCGTAGATGGATATGACACAGAATATGGGGAAAGAGGTGTACAATTGTTAGGGGGACAAAAGCAGAGAATAGCAATTGCAAGAGCCATAGTTCCGAACCTAAGGATACTATTACTAGATGAAGCAACAAGTGCCCTGGATGTGCAATCAGAACAAGTTGTACAATA 1172 0.4249 MIMVFILNEETSALDSESESLVQIALDQASMGRTTLVGTELMLLPTSSLTDLVEVVNGGCIDEIVARSSAGQLSTGKSSPAIFPKSSLPDDVTPPPVSHHSSSFPRFLSLNAPEWKQDRVSLLVKTTSAVTIVMIIGLVAQNDSTQIAVEAVCNLRTVTSFGSIGKVLQVFDEAQEATRREARKKSWLAGIGMGSAQLLSFMLWAFEFCRGRKHGSDLAKSSTAVASVFKILDRKSLIPNPKGGDGNNGLKLEKISGKIEMENVDFTYPGRPENPILCNFSLEVKAGKQQTALVSQEPVIYSGTIRDNILFGKPEPTEKEMVAARAANAHEFILSLVDGYDTEYGERGVQLLGGQKQRIAIARAIVPNLRILLLDEATSALDVQSEQVVQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00706 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 390 IPR027417 -
Bva04g00706 390 Pfam ABC transporter 253 379 IPR003439 GO:0005524
Bva04g00706 390 SUPERFAMILY ABC transporter transmembrane region 139 233 IPR036640 GO:0005524|GO:0016021
Bva04g00706 390 Gene3D ABC transporter type 1, transmembrane domain 142 211 IPR036640 GO:0005524|GO:0016021
Bva04g00706 390 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 289 390 IPR039421 -
Bva04g00706 390 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 289 390 - -
Bva04g00706 390 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 140 211 - -
Bva04g00706 390 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 216 288 - -
Bva04g00706 390 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 66 IPR039421 -
Bva04g00706 390 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 140 211 IPR039421 -
Bva04g00706 390 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 216 288 IPR039421 -
Bva04g00706 390 Gene3D - 249 289 IPR027417 -
Bva04g00706 390 Gene3D - 4 91 IPR027417 -
Bva04g00706 390 Gene3D - 291 390 IPR027417 -
Bva04g00706 390 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 4 66 - -
Bva04g00706 390 Gene3D ABC transporter type 1, transmembrane domain 98 131 IPR036640 GO:0005524|GO:0016021
Bva04g00706 390 Gene3D ABC transporter type 1, transmembrane domain 216 248 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00706 Bva-Chr4 4658059 4660566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00706 4 64 Calmodulin-binding Proteins AT2G36910 50.820 1.16e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00706 K05658 - gmx:100819207 330.872