Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00700 ATGACAAAAATAACCCCATTGTTTACCAAAATGCCACTTCACTTCCATCTCTCCCTCCTCCTTCTCCTCAACCATGCACAGTCTCAGACTCTGCCTCATGATCAAGAACAGGCAGTCCTATTAAAGCTAAAGCGGTACCTAGAAAACCCACCATTTCTCAGTCACTGGAACCCATCAAACTCTTCCCACTGCTCTTGGCCAGAGATTACCTGCACCAAAGGCTCTATTACTGCACTGGCTATGGTCAACACCAACATCACTAAACCGTTTCCACCTTTTATCTGTGACCTCCAGAACCTCTcgaaaattgattttcaaatGAATCACCTTCCCGGGGAGTTCCCAAAATCTTTGTATAACTGCTCCAAGCTCGAGTATCTCGACTTGTCGCAGAACTGGTTCGTGGGTAAAATTCCAGATGACATTGACCGCTTGTCTAACCTGCGTTTTCTTATCCTTGGTGCCAATAATTTCTCAGGCGACATTCCGGCCAGCATCTGGCTGTTAAAGGAGCTAAGATCTCTTCAACTTTTTGACTGTCAATTCAACGGTACCTTGCCGGCGGAAATTGGTAACTTGACCAATCTTGAAATCTTATATATCTTTAACAATAACTTAATTGGGGAAATCCCAGAAACAATTGGGGATATGTTGGCTTTGGAGGAAGTAGCCTTATATGGTAACCAATTAAGTGGGGAAATTCCCAGCGGTTTTTTCACTCTGAAAAATCTAAGATTACTGTTCCTTTACAGAAACAGGCTTTCTGGGGAGATAAGAATGCCTGCGGTGGTTGAAGCACTGAACTTGACCATCCTTGATCTGTCACAGAATCTTCTCACTGGAAACATACCAGAGGATCTTGGAAAGCTCAAAAACGTAACAGGCTTTGCTTTGCAAATGAATCAATTATCTGGTCCCATACCTGAAAGCCTGGCCCGTCTTCCAGCTCTGGTAGATTTCGTGGTTTTCAGCAACAAATTGTCAGGCACTCTGCCACTTGATTTCGGCCTCTACTCAAGGCTTGAAACCTTTCAGGTTGCATCTAATAGTCTTACAGGACGCTTGCCTGCCAACTTATGCTATCAGGGAAAGCTGGTAGGATTAACAGCTTATGACAACAAACTGAGTGGGGAGTTGCCAGAATCCTTAGGAAATTGCGCTAGTCTCAGAGCATTGAGAATTTCCAATAATGAGTTTTCTGGCAATATACCTAGCCTCCTTTGGACATCCCTTAATTTGACAATGTTCGagataaatgagaataagTTTACTGGTGAGCTTCCTCAAAGGTTGTCTACGAATCTTTCACTCTTGTCTATAAGTCACAACCAGTTTTCTGGTAGAATTCCAGCTGGGGTATCTTCCTCGACTAATGTGGTGGTCTTCAATGCCAGCAAGAACCTCTTCGATGGAAGTATTCCGCAAGAGCTAACAGCTCTTCCCAAGTTGACAAAATTGTTGCTTGATCAGAATCACCTCAAAGGGCCACTTCCATCAGATATAATATCCTGGAAATCCTTAGTAACTCTAAACTTGAGCCAAAATCAGCTCTCTGGCCAAATCCCAGATGAAATCGGTCGATTGCCTGTCCTTTCCGAGCTTGACTTGTCCCAAAATGAATTCTCTGGCCAAATTCCATCTGAATTAGGCCGTCTGAGAGCCACCAATCTCAATCTCTCGTCCAACCAATTGACTGGTAGGATTCCGAGTGAATTCGAAAATCTTGTCTATGGCTCAAGCTTTTTAAACAATTCTGGTCTCTGTGCTGATACCCCAGTACTAAACCTCACTTTATGCTATTCTGGTTCTCTGAGATCAACCAAGAGGTCGTCTGTGTCTCTTGTTTTGATCATAAGCCTGGTGGTAGTAGCCTCTGCTTTCTTGTGTTTATTATTCTTGGTAATCAGAGctcacaaaaaaagaaataaaggatTTGACACCACGTGGAAGCTCACTTCCTTTCAGAAGCTGGGTTTTACAGAATCAAACATCCTATCAGGACTCACAGATCGTAACATTATAGGCAGAGGTGGATATGGTACTGTATACCGTGTTCAGATCAATCACCAAGGTGATTTTGTTGCTGTGAAGAAGACATGGAATAACAGAAAGCTGGAACACAAGCTTGAGAAAGCATTTCTTGCAGAAGTAGAGGCACTGAGCTCCATTCGTCATAACAACATTGTGAAGTTGCTATGTTGCATTTCTGGTGAAAGTTCTTGGCTCCTCGTGTATGAGTATCTTGAAAACCATAGCCTTGATCGGTGGCTGCACAAAAAGAACGGGTCATCAGCTATGTCAGGTTCTGTCCAGCATGCGGTCCTTGATTGGCCGAAGAGATTACAGATTGCCTTAGGTGCTGCTCACGGCCTGAGCTACATGCACCATGACTGCGTACCACTTATTGTTCATAGAGATGTGAAATCCAGCAACATTCTGCTGGATTCTGAATTCAATGCCAAGATTGCTGATTTTGGTCTGGCTAAATTGTTGATCAACCCAGGAGAACTTGCTACCATGTCAGCTGTGGCAGGCTCATTTGGTTATATTGCTCCAGAATATGCTCAAACAACCCGagttaatgaaaaaattgatgtgTACAGCTTTGGGGTTGTTTTATTGGAGCTGACAACAGGAAAAGAAGCTAATTATGGAGATGAGTACTCATCCCTGGCTGAATGGGCATGGCGTCACGTTCAAGTAGGAAGCTCTGTAGAAGATGTTCTAGatgaagaaataaaggaaCCCTGTTATCTAGAGGAAATGTGCTGTGTCTTCAAACTTGGACTCATGTGTACTGCAACACTGCCAGCTAGTAGACCGTCCATGAAGGAGGTTGTGCAGATGTTGCTCCGCTGCAGCGGTCCACTGGTCTACGGAGAGAAGAATCTTAGAGGTTATTATGATGTTGCTCCTCTACTTAAGGATTCCAACAGAGAGAGTAGGTTAGATATTGATAATGATAGCTA 2969 0.4254 MTKITPLFTKMPLHFHLSLLLLLNHAQSQTLPHDQEQAVLLKLKRYLENPPFLSHWNPSNSSHCSWPEITCTKGSITALAMVNTNITKPFPPFICDLQNLSKIDFQMNHLPGEFPKSLYNCSKLEYLDLSQNWFVGKIPDDIDRLSNLRFLILGANNFSGDIPASIWLLKELRSLQLFDCQFNGTLPAEIGNLTNLEILYIFNNNLIGEIPETIGDMLALEEVALYGNQLSGEIPSGFFTLKNLRLLFLYRNRLSGEIRMPAVVEALNLTILDLSQNLLTGNIPEDLGKLKNVTGFALQMNQLSGPIPESLARLPALVDFVVFSNKLSGTLPLDFGLYSRLETFQVASNSLTGRLPANLCYQGKLVGLTAYDNKLSGELPESLGNCASLRALRISNNEFSGNIPSLLWTSLNLTMFEINENKFTGELPQRLSTNLSLLSISHNQFSGRIPAGVSSSTNVVVFNASKNLFDGSIPQELTALPKLTKLLLDQNHLKGPLPSDIISWKSLVTLNLSQNQLSGQIPDEIGRLPVLSELDLSQNEFSGQIPSELGRLRATNLNLSSNQLTGRIPSEFENLVYGSSFLNNSGLCADTPVLNLTLCYSGSLRSTKRSSVSLVLIISLVVVASAFLCLLFLVIRAHKKRNKGFDTTWKLTSFQKLGFTESNILSGLTDRNIIGRGGYGTVYRVQINHQGDFVAVKKTWNNRKLEHKLEKAFLAEVEALSSIRHNNIVKLLCCISGESSWLLVYEYLENHSLDRWLHKKNGSSAMSGSVQHAVLDWPKRLQIALGAAHGLSYMHHDCVPLIVHRDVKSSNILLDSEFNAKIADFGLAKLLINPGELATMSAVAGSFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANYGDEYSSLAEWAWRHVQVGSSVEDVLDEEIKEPCYLEEMCCVFKLGLMCTATLPASRPSMKEVVQMLLRCSGPLVYGEKNLRGYYDVAPLLKDSNRESRLDIDNDS 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00700 989 ProSiteProfiles Protein kinase domain profile. 668 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00700 989 Gene3D Ribonuclease Inhibitor 31 310 IPR032675 -
Bva04g00700 989 Pfam Protein kinase domain 671 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00700 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Bva04g00700 989 SUPERFAMILY L domain-like 267 435 - -
Bva04g00700 989 SMART LRR_typ_2 480 504 IPR003591 -
Bva04g00700 989 SMART LRR_typ_2 193 217 IPR003591 -
Bva04g00700 989 SMART LRR_typ_2 145 169 IPR003591 -
Bva04g00700 989 SMART LRR_typ_2 528 552 IPR003591 -
Bva04g00700 989 SMART LRR_typ_2 241 267 IPR003591 -
Bva04g00700 989 SMART serkin_6 668 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00700 989 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 204 - -
Bva04g00700 989 SUPERFAMILY RNI-like 80 559 - -
Bva04g00700 989 ProSitePatterns Protein kinases ATP-binding region signature. 674 698 IPR017441 GO:0005524
Bva04g00700 989 Gene3D Transferase(Phosphotransferase) domain 1 748 956 - -
Bva04g00700 989 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 193 982 - -
Bva04g00700 989 Pfam Leucine Rich Repeat 123 144 IPR001611 GO:0005515
Bva04g00700 989 Gene3D Phosphorylase Kinase; domain 1 651 747 - -
Bva04g00700 989 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Bva04g00700 989 Gene3D Ribonuclease Inhibitor 316 597 IPR032675 -
Bva04g00700 989 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 193 982 - -
Bva04g00700 989 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 204 - -
Bva04g00700 989 SUPERFAMILY Protein kinase-like (PK-like) 661 950 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00700 Bva-Chr4 4633020 4638960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00700 36 988 Receptor kinase-like Gene Family AT5G25930 50.302 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g00700 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00700 - - gmx:100785907 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00700 04 4633020 4638960 Bva04g00700 04 4633020 4638960 ECH