Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00695 ATGCCAAATTtgcattacattttttttgtgtttctagttctttttcttcttctgcagAATCCTAATACAGCACTATGCCATACAAAGGGAATCAGACCGAGGCGTTCTACAGGGAATGGGTTAACAGTTAACATGACCCAGGTCCAAGACTCTGAAGAGCAATTCATGAAATGGGTCAAGTTTGTTGGCAGCCTCAAGCATTCTGTTTTTAAGGcagcaaaaaataaactttttgcTTCTTACACTCTGCACGTTGCCAAGAATCCGGCGGCCGGAGATTTCACAACCATTCAAGAAGCCATTGATTCTCTTCCATTGATCAATCTCGTAAGAGTGGTCATCAAGGTTCATGCAGGAGTTTACACggAGAAGGTTAATATACCTCCAATGAAAGGCTTCATAACCATAGAAGGAGCAGGGGCAGATAATACAATTGTTCAATGGGGAGACACTGCTCAAACACCTGGCCCAAAAGGGCAGCCACTGGGAACCTACGGCTCTGCAACCTTCGCTGTGAATTCACCTTATTTCATTGCAAAGAACATAACTTTCAAAAACACAACCCCTGTTCCTGGACCAGGAGCAGTTGGAAAGCAAGCGGTGGCACTGAGAATTTCTGCAGATAATGCAGCATTCTATGGCTGCAAATTCTTGGGAGCACAGGACACACTGTATGATCAACTGGGTAGGCATTATTATAAGGATTGCTACATTGAAGGCTCAGTTGATTTCATATTCGGAAacgctctctctctctttgagGGATGTCACGTGCATGCAGTAGCACAGAATCTGGGTGCCGTAACAGCGCAAGGAAGGAAAAGTCTATTAGAGGACACGGGGTTTTCATTTGTGAACTGTAAGGTCACGGGGTCAGGGGTGCTGTACCTTGGAAGGGCTTGGGGTCCCTTTTCTAGGGTCGTCTTTGCTTACACTTACATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAGCCGTGAGATgactGTATTCTATGGGCAATACAAGTGCACAGGAGCAGGGGCTAGCTTTGCAGGAAGAGTGTCATGGTCAAGAGAGTTCACTGATGAGGAGGCTAAGCCTTTTATCTCCCTTAGCTTCATTGATGGCTCCGAGTGGATCCAACTCTA 1145 0.4253 MPNLHYIFFVFLVLFLLLQNPNTALCHTKGIRPRRSTGNGLTVNMTQVQDSEEQFMKWVKFVGSLKHSVFKAAKNKLFASYTLHVAKNPAAGDFTTIQEAIDSLPLINLVRVVIKVHAGVYTEKVNIPPMKGFITIEGAGADNTIVQWGDTAQTPGPKGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPGPGAVGKQAVALRISADNAAFYGCKFLGAQDTLYDQLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAVAQNLGAVTAQGRKSLLEDTGFSFVNCKVTGSGVLYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPSREMTVFYGQYKCTGAGASFAGRVSWSREFTDEEAKPFISLSFIDGSEWIQL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00695 381 SUPERFAMILY Pectin lyase-like 79 380 IPR011050 -
Bva04g00695 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 380 - -
Bva04g00695 381 Pfam Pectinesterase 85 375 IPR000070 GO:0030599|GO:0042545
Bva04g00695 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Bva04g00695 381 Gene3D - 79 381 IPR012334 -
Bva04g00695 381 PANTHER PECTINESTERASE 6 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00695 Bva-Chr4 4599470 4602335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00695 3 379 Carbohydrate Esterase AT5G47500 42.328 9.73e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00695 K01051 - gmx:100793314 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00695 04 4599470 4602335 Bva04g00695 04 4599470 4602335 ECH