Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00690 ATGTCGTGGCAAACCTACGTAGATGAGCACCTTATGTGCGAAATTGATGGAAATCATCTCAGTGCTGCAGCTATCATCGGCCAAGATGGCAGCGTTTGGGCACAGAGTTCAACCTTCCCTCAGTTCAAACCTGAAGAAATAACTGCAATTGTGAATGATTTTGCTGAGCCTGGGTCACTTGCTCCAACTGGATTATATCTTGGTGGGGCAAAATATATGGTGATCCAAGGTGAACCTGGGGCAGTCATCCGAGGAAAGAAGGGACCTGCTGGTGTTACCGTCAAGAAGACCAGTCAGGCCTTAATCATTGGCATTTACGATGAACCAATGACTGCGGGGTCTCTAAACCTCTTGTGTAATAATATTATGGTTATCAAGAGTCATGGGATCTGCGTGTGGCAAACAAGTGTTTTGAGTGCTTG 422 0.4597 MSWQTYVDEHLMCEIDGNHLSAAAIIGQDGSVWAQSSTFPQFKPEEITAIVNDFAEPGSLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPAGVTVKKTSQALIIGIYDEPMTAGSLNLLCNNIMVIKSHGICVWQTSVLSA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00690 140 Gene3D Dynein light chain 2a, cytoplasmic 1 135 - -
Bva04g00690 140 CDD PROF 2 119 IPR005455 GO:0003779
Bva04g00690 140 PANTHER PROFILIN 1 120 - -
Bva04g00690 140 Pfam Profilin 1 122 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Bva04g00690 140 SMART prof_2 1 130 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Bva04g00690 140 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Bva04g00690 140 SUPERFAMILY Profilin (actin-binding protein) 2 121 IPR036140 -
Bva04g00690 140 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bva04g00690 140 PANTHER PROFILIN 1 120 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00690 Bva-Chr4 4572800 4574878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00690 1 122 Cytoskeleton Gene Families AT2G19760 72.131 6.61e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00690 K05759 - qsu:111995052 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00690 04 4572800 4574878 Bva08g02185 08 14339234 14340024 ECH
Bva04g00690 04 4572800 4574878 Bva02g02348 02 23029201 23030829 ECH
Bva04g00690 04 4572800 4574878 Bva10g00153 10 3057153 3058992 ECH
Bva04g00690 04 4572800 4574878 Bva06g02577 06 16282464 16283505 ECH
Bva04g00690 04 4572800 4574878 Bva04g00690 04 4572800 4574878 ECH