Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00689 ATGTCGTGGCAAACCTACGTTGATGAGCATTTGATGTGCGACATCGACGGCCAAGGCCAGCATCTCCACGCCGCTGCCATTATCGGCCACGATGGCTCTGTCTGGGCTCAGAGCTCTAACTTCCCTCAGTTTAAACCCGATGAGATCGCTGGTGTCATGAAAGATTTTGACGAACCAGGTCATCTAGCACCTACAGGCTTGCACGTTGCAGGCGCCAAATACATGGTCATTCAGGGAGAGCCTGGAGCTGTCATTCGCGGGAAGAAGGGATCTGGAGGCATCACCATAAAGAAAACTGGTCAAGCTGTAGTTGTTGGCATCTATGAGGAACCAGTGACTCCTGGACAATGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTCGTTGATCAGGGTCTGTA 401 0.5137 MSWQTYVDEHLMCDIDGQGQHLHAAAIIGHDGSVWAQSSNFPQFKPDEIAGVMKDFDEPGHLAPTGLHVAGAKYMVIQGEPGAVIRGKKGSGGITIKKTGQAVVVGIYEEPVTPGQCNMVVERLGDYLVDQGL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00689 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Bva04g00689 133 SMART prof_2 1 133 IPR005455 GO:0003779
Bva04g00689 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Bva04g00689 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Bva04g00689 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Bva04g00689 133 PANTHER PROFILIN 1 133 - -
Bva04g00689 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Bva04g00689 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Bva04g00689 133 CDD PROF 2 132 IPR005455 GO:0003779
Bva04g00689 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00689 Bva-Chr4 4568257 4570561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00689 1 133 Cytoskeleton Gene Families AT4G29340 85.075 3.52e-83 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00689 K05759 - csv:101219322 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00689 04 4568257 4570561 Bva04g00689 04 4568257 4570561 ECH