Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00673 ATGGTGGAGAAGACAAAGGGTAGAAAGGAAGAGGTGGTTACCCGAGAGTACACCATCAACCTCCACAAGCGCTTGCATGGCTGTACATTTAAGAAGAAAGCTCCTAAGGCAATAAAGGAGATAAAGAAGTTTGCCCAGAAAGCCATGGGGACCAATGATGCGAGAGTTGATGTGAAGCTGAACAAGTATGTTTGGAGCAGGGGGATCCGAAGTGTCCCAAGGAGGATTAGGGTACGTATTGCTCGCAAGAggaatgatgatgaagatgcaAAGGAGGAGCTGTACTCTCTTGTTACAGTTGCTGAAATCCCTCCAGAGGGTCTCAAAGGATTGGGCACGAAGGTCATTGAGGATGAGGATTG 362 0.453 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIKKFAQKAMGTNDARVDVKLNKYVWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPPEGLKGLGTKVIEDED 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00673 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bva04g00673 120 Gene3D - 9 120 IPR023621 -
Bva04g00673 120 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 120 - -
Bva04g00673 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Bva04g00673 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bva04g00673 120 PANTHER 60S RIBOSOMAL PROTEIN L31 1 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bva04g00673 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00673 Bva-Chr4 4479070 4480626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00673 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 82.353 4.09e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00673 K02910 - han:110928512 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00673 04 4479070 4480626 Bva04g00673 04 4479070 4480626 ECH