Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00657 ATGAGAGAAAAGGGTCGTTATGAAGAGAGGGGTTCCTCAGATATTGCTGGCAAAGTGGTGGTGGTTGCTGTTAAAGCggcaaaagaaatttcaagaaatgctATAGTGTGGGCTTTGACTCATGTTGCTCAACCTGGGGACTGCATTAAACTATTGGTCATCATTCCAGCAATCTCCTCAAGTAAAAGGATATGGGGTCTTTCGAGATTTACCACTGATTGCACCACTAGTCACTGGGGATCTTATGCAGGAACTGCTTCAGATCAGAAAGAATATATTGCAAATTTGTGTTCACAAATGGTGCAACAACTCCATGAATTTTATGACCCAGAGAAGATAAAGGTCAGGGTAAAGATTCTTTCTGGCTCTATATGTGGAGCAGTGGCTGCTGAAGCCAAGAGAGTCCAATCAAGCTGGGTTATATTGGATAAAAAATTGAAACAGGAAAGGAAATGCTGCATGGAGGAGCTGCATTGCAATATTGTGGTTATGAAACGCTCTCAACCCAAGGTTCTTCGTTTGAATTTGATGAGTTCAAGAAAGATGGAACTTGAAGGGGCTAGTCCATGGTCACCAGAGCTCAATGCATCTCCAAGGAACTTCAAAGGCGACTCTAAACATCTAAGTGATATCAGAGGTCCGGCTGTTACTCCTGCTAGTAGTCCTGAACAGGGGTCACCATTAACTGTAACTGATGCTGGAACTTCATCAATGTCAAGTTCGGATCCCGGGGCTTCACCATTTTTCCATTCTGATATACATGGGAGAAGAAGGatagaatttccttttgtCCATGAAGAATCGACTAATATGGAGGAGAGTGAATCCTTATCCGAGTCAGAGAGTGAAAAGCTGAACTTGTCATCCAAACGGTTGTATTTCCAGCCATGGATTGAAGACTTAAGCACTGATAGTGAATTCTCAAAATATGATGAAATTATGCAAACAACCAGTGGTAAGGCTTTGATTTCTACCCATGAAATCTTGCTCCAGAAATACTCAAGGTTGGATCAAGAACCTGGTATAGGAGGCCTTAACTGTAAAATTGAAGTGAACTTAAGCAAAAGTGTCAGAGAAGCAATTTCACTGGCCAGAAATGCGCCTCTGGTTCCTCCTCCGCTCTGCTCTGTTTGTCAGCACAAGACACCTGCATTTGGGAATCCTCCAAAATGGTTTACATATGCTGAATTGGAACTTGCCACAGGTGGATTTTCACAGGCAAATTTCTTGGCCGAAGGTGGGTATGGTTCTGTACACCGTGGTGTCTTACTTGATGGACAGGTTGTTGCAGTCAAACAGTATAAATTAGCCAGTAGTCAAGGTGATAAGGAATTTTGCTCAGAAGTTGAGGTTTTAAGCTGTGCACAGCATCGTAATGTTGTGATGCTAATTGGATTTTGTGTGGAGGGTGGAAGAAGATTGCTAGTTTATGAATATATCTGCAACAGGTCTCTAGATTCTCATCTTTATGGACGAAAGCAGGGTGTATTGGAGTGGCATGCACGGCAAAAGATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCACGAGGAATGTAGAGTGGGTTGTATTGTGCACCGTGATATGAGACCTAACAATATCCTCCTCACTCACGATTTTGAGGCATTGGTGGGAGACTTTGGGCTTGCTAGGTGGCAGCCAGATGGAGATATGGGTGAGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGGGTAGTATTACTGGAGCTTGTTACAGGAAGGAAAGCCATTGATATAAGCCGGCCCAGAGGACAGCAATGCCTCACTGAATGGGCACGCCCTTTACTTGAAAGACAAGCTATTCATGAACTGGTTGATCCTAGCATAAGCAACTGCTATATCGATCAAGAGGTTCATCGTATGTTGCATTGTTCATCATTGTGTATCCGGAGGGACTCTCATTTAAGGCCTCGAATGTCTCAGGTACTCCGAATGCTAGAAGGCGACATTCGATGTGATACTTATCACATTTCCATCTCCTA 2066 0.4264 MREKGRYEERGSSDIAGKVVVVAVKAAKEISRNAIVWALTHVAQPGDCIKLLVIIPAISSSKRIWGLSRFTTDCTTSHWGSYAGTASDQKEYIANLCSQMVQQLHEFYDPEKIKVRVKILSGSICGAVAAEAKRVQSSWVILDKKLKQERKCCMEELHCNIVVMKRSQPKVLRLNLMSSRKMELEGASPWSPELNASPRNFKGDSKHLSDIRGPAVTPASSPEQGSPLTVTDAGTSSMSSSDPGASPFFHSDIHGRRRIEFPFVHEESTNMEESESLSESESEKLNLSSKRLYFQPWIEDLSTDSEFSKYDEIMQTTSGKALISTHEILLQKYSRLDQEPGIGGLNCKIEVNLSKSVREAISLARNAPLVPPPLCSVCQHKTPAFGNPPKWFTYAELELATGGFSQANFLAEGGYGSVHRGVLLDGQVVAVKQYKLASSQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNRSLDSHLYGRKQGVLEWHARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGEETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGRKAIDISRPRGQQCLTEWARPLLERQAIHELVDPSISNCYIDQEVHRMLHCSSLCIRRDSHLRPRMSQVLRMLEGDIRCDTYHISIS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00657 688 Pfam Protein kinase domain 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00657 688 Gene3D Phosphorylase Kinase; domain 1 375 479 - -
Bva04g00657 688 ProSiteProfiles Protein kinase domain profile. 404 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00657 688 SUPERFAMILY Protein kinase-like (PK-like) 385 675 IPR011009 -
Bva04g00657 688 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Bva04g00657 688 CDD STKc_IRAK 410 676 - -
Bva04g00657 688 MobiDBLite consensus disorder prediction 219 246 - -
Bva04g00657 688 PANTHER OS01G0253100 PROTEIN 15 678 IPR045271 GO:0004714|GO:0006468
Bva04g00657 688 MobiDBLite consensus disorder prediction 185 251 - -
Bva04g00657 688 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 15 678 - -
Bva04g00657 688 Gene3D Transferase(Phosphotransferase) domain 1 480 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00657 Bva-Chr4 4387468 4392547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00657 379 670 Trihelix Transcription Factor Family AT1G68690 52.703 1.14e-100 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bva04g00657 Pkinase 7.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00657 - - aprc:113855006 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00657 04 4387468 4392547 Bva04g00657 04 4387468 4392547 ECH