Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00655 ATGGGCAGAAAGTGTTCACATTGTGGAAACATAGGCCACAATTCTAGAACCTGCGCATCTTTCAGAAGCACTTCTGTTGGATTAAGGCTTTTTGGTGTGCAACTAGATTTATCTTCCTCTTCTGTTGCCATGAAGAAAAGCTTCAGCATGGATTCCTTgccttcatcatcttcctctCCATCTTCTTCATCAAGAGTAACAATTGATGAAAATTCTGACAAAACTTCTATTGGGTATTTATCAGATGGTCTCATAGGTCGAGTAcaagagaggaagaaagGAGTCTCATGGACAGAAGAAGAGCACAGAACCTTCCTTATTGGGCTGGAGAAGCTGGGCAAAGGTGACTGGAGGGGCATCTCCCGAAACTATGTCACTACAAGGACCCCAACCCAAGTTGCAAGCCATGCTCAAAAGTATTTTCTTCGATTGGCAACAATTAATAAGAAGAAACGACGTTCAAGTCTTTTTGATATGATAGGAAACAAAAGCAGCAACATCAACACAGCTGGTAATCCCATAAGCAGCTCTGATGATTGCAAACCTGCAGATTCAGTTTCTACTCAGAATGATGCCACTTTAAGTCTTATTACTTCCTTTAAACAAGAAATTACCAAATCAGGTAAGCAAGACACTGTTCATTCTCAAAAAGCTGCAGATCATGACGCTGTGCCAATCTGGCTATATTCTCAGATGAAATCTTCAAATATGGGAAAACCCAGGTCCCCAAATGCAGCACCAGATCTGGAACTCACTCTTGCAGCCCCCAAGACCATGGAACCAAAAAAGTCATCTCCTGGTCAATACCTTCTTGGGCCAATTAGTGTGACATA 833 0.401 MGRKCSHCGNIGHNSRTCASFRSTSVGLRLFGVQLDLSSSSVAMKKSFSMDSLPSSSSSPSSSSRVTIDENSDKTSIGYLSDGLIGRVQERKKGVSWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDMIGNKSSNINTAGNPISSSDDCKPADSVSTQNDATLSLITSFKQEITKSGKQDTVHSQKAADHDAVPIWLYSQMKSSNMGKPRSPNAAPDLELTLAAPKTMEPKKSSPGQYLLGPISVT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00655 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
Bva04g00655 277 CDD SANT 96 141 IPR001005 -
Bva04g00655 277 PANTHER TRANSCRIPTION FACTOR KUA1 1 275 - -
Bva04g00655 277 MobiDBLite consensus disorder prediction 168 187 - -
Bva04g00655 277 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Bva04g00655 277 MobiDBLite consensus disorder prediction 234 277 - -
Bva04g00655 277 ProSiteProfiles SANT domain profile. 97 145 IPR017884 -
Bva04g00655 277 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Bva04g00655 277 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 275 - -
Bva04g00655 277 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Bva04g00655 277 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Bva04g00655 277 MobiDBLite consensus disorder prediction 49 69 - -
Bva04g00655 277 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Bva04g00655 277 Gene3D - 95 148 - -
Bva04g00655 277 SMART sant 93 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00655 Bva-Chr4 4377698 4379012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva04g00655 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00655 - - qlo:115976132 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00655 04 4377698 4379012 Bva04g00655 04 4377698 4379012 ECH