Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00648 ATGGTTATTTGGTTAGTGATTCCGGCAGCAAAAAGCTCGAGAGGTGATCATGCCAACAGCACTCTTGCTCTTTTCGTTCTTATTCAGTATATTCCTAGATTGTTTCTTATCTTCCCTTTGAACCGGCGTCTTTTAAAATCCTCGGACGTTCTTACCAAGACTCCCTGGGCAGGAGCTTTTTACAATCTGTTTCTCTACATGCTAGCTAGTCATGTTATCGGAGCTTCATGGTATCTGGCCTCAATAGGGCGACAATTTTCCTGCTGGAAATCTCAGTGcagaaaggaaaattcaaaTCTCATGGCTTGCCTTCCTAGTTTTCTTGGTTGTAATAGTTTGACGTTACCTGATAGGATGTACTGGCTAAATATCACCCAAGTTGTTACCAAATGTGATGCAAAGAACGAGGACAAATTTAAGTTTGGGATATTTGCGGATGCTTTTGTTAATGACGTAGCATCTCCAAAATTTACGGAAAGATACTTATATTGTCTTTGGTGGGGTTTAAGAAATCTAAGTTCATATGGACAGAGTTTGGACACCACCACCTACCTTGGTGAGACAATCTTTTGCATTTTCCTCTGCATTGTTGGATTAATTCTCTTTTCACTACTGATCGGCAACATGCAGACATATATTACGTCAATGTCGATAAGAATTGAAGAATTGAGGGTAAAAAAAAGGGACACTGAGGAGTGGATGAGACATAGGCAGTTACCTCCAGAATTGCAGAATCGTGTCCGTCGCTTTGTTCAATATAAATGGCTTGCCACAAGAGGAGTTGACGAAGAATCCATATTGGAGATATTACCGTTAGATCTTCGTCGTGAAATTCAACGCCACTTATGTCTTTCTCTTGTTCGCCGTATGAAAGAGGGCTACTACTATATGGCTATGCTTGAGGGCGGGCCCAGTGACAGTGGCATGCAGAGAAGCTATGAGGATGAGATACAGAGTTCATCAGTGGACAATCAAAATAGTTTACAGCGTCTTGGTGCTACCGTTTTAGCTTCTAAGTTAGCTGCAAATACAAAGCGGGGTGTTATGAGTAGCAGCACTACAATGCGAGAGAGGGATCCTGTTCCCCAGTTGTTCAAACCAGATGAACCTGATTTCTCTGGAGGCCATGAGGAAGTTTAATTAGCAAAAGAACCGATGAACGGCTGGAAAATGAGTTTGATAAAGATTAGTTAGGATAATTATATGACTCGGAGTGTAAATGCTCTGATAGGTCAGTAATGATTTgattacattcttaatttcttgCCTTGAATGTATTCACTTGCAGATACTGTATAACATGTAATGAAGGAGGCAACTCTCTTGTTTTCTTCGGCTTTGGGAAACTGGGGTTCTCAGAAAGAAAGGTATCTGCTTTTTGGAGGCTTTCTCCCCTCTCTGTCGACATCATAGAATGGAGAAGGACACTAAGGCTGTAGCAGCTGAAGATTCTAAACTTGATGTGTTCGAAGATGATGAcgaatttgaagaatttgagaTGGATGAAGGATGGGATGacaaagaagaggaaaaagagaCAAGACAGCAATGGGAGGATGATTGGGACGATGATGATGTCAATGATGATTTCTCGGCTCACTATCATGCGGCATGGGGAGGGGGGACAATCAGGGAAGAGGAAGACATGTCGATCGAATTggagattgaattaattta 1677 0.3983 MVIWLVIPAAKSSRGDHANSTLALFVLIQYIPRLFLIFPLNRRLLKSSDVLTKTPWAGAFYNLFLYMLASHVIGASWYLASIGRQFSCWKSQCRKENSNLMACLPSFLGCNSLTLPDRMYWLNITQVVTKCDAKNEDKFKFGIFADAFVNDVASPKFTERYLYCLWWGLRNLSSYGQSLDTTTYLGETIFCIFLCIVGLILFSLLIGNMQTYITSMSIRIEELRVKKRDTEEWMRHRQLPPELQNRVRRFVQYKWLATRGVDEESILEILPLDLRREIQRHLCLSLVRRMKEGYYYMAMLEGGPSDSGMQRSYEDEIQSSSVDNQNSLQRLGATVLASKLAANTKRGVMSSSTTMRERDPVPQLFKPDEPDFSGGHEEVLAKEPMNGWKMSLIKISDNYMTRSVNALIGQFDYILNFLPMYSLADTVHVMKEATLLFSSALGNWGSQKERYLLFGGFLPSLSTSNGEGHGCSSRFTCVRRRIRIDGRMGQRRGKRDKTAMGGLGRCQFLGSLSCGMGRGDNQGRGRHVDRIGDIN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00648 535 Gene3D Helix hairpin bin 215 283 - -
Bva04g00648 535 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 1 290 - -
Bva04g00648 535 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 311 373 - -
Bva04g00648 535 SUPERFAMILY cAMP-binding domain-like 222 290 IPR018490 -
Bva04g00648 535 MobiDBLite consensus disorder prediction 347 373 - -
Bva04g00648 535 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 311 373 - -
Bva04g00648 535 Pfam Ion transport protein 20 216 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva04g00648 535 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 290 - -
Bva04g00648 535 SUPERFAMILY Voltage-gated potassium channels 23 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00648 Bva-Chr4 4329858 4335662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00648 275 379 Ion Channels AT5G14870 41.739 2.26e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00648 K05391 - gmx:100802812 461.84