Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00639 ATGAAGGAGAATAACAAGAGTGAAAGTGGGGGTGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTAGACGAGCAGCTTCAGAGGCATCTCAGCAGAGCATGGACGAtggagaagaacaagaagaaagaagaagacgaGCCTGCAGGGAGGTCTACTCAAACCAGGCAAGAATGGGAGATTGACCCCTCAAAGCTCCTAATCAAGAGTGTCATTGCTCGTGGTACTTTTGGTACCGTTCACCGTGGCATTTATGATGGCCAAGATGTTGCAGTTAAACTCCTTGACTGGGGAGAAGAGGGCCATCGGTCAGATGCTGAAATAGCTTCCCTGAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGtttcttGGGGCAACAATGGGGACATCAGACCTACAGATACAAACGGAAAATGGTCAAATAGGCATGCCCAGTAATATTTGTTGCGTTATTGTTGAATATTGTCCAGGGGGTGCTCTTAAGtcttatcttataaaaaaccGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTCCAATTGGCGCTTGATCTTGCAAGAGGGTTGAGCTATCTCCACTCGAAAAAAATTGTCCACAGAGATGTTAAAACGGAAAATATGCTTCTGGACAAGACAAGAACCTTGAAAATAGCTGATTTTGGAGTAGCTCGTATAGAGGCTTCCAATCCTCATGACATGACTGGTGAAACTGGAACACTTGGCTACATGGCTCCTGAGGTTTTAAATGGTAGTCCATATAACAGAAAGTGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAGATATACTGTTGTGACATGCCATATCCAGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTTCGTCAGAATCTGAGACCGGAAATGCCACGTTGTTGCCCGACATCTCTCGCAAATGTAATGAAAAGATGCTGGGATGCTAATCCTGATAAGAGACCAGAGATGGATGAGGTAGTGAGCATGATAGAAGCCATTGACACTTCAAAGGGTGGAGGTATGATCCCTCATGATCAGCCTCAGGGTTGTTTGTGTTTCCGCAGGTCAACTGGTCTAAGTGATTCCCCACAATTGAAGTCCAAGTTTGAATA 1148 0.4329 MKENNKSESGGGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKKKEEDEPAGRSTQTRQEWEIDPSKLLIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFLGATMGTSDLQIQTENGQIGMPSNICCVIVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGSPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEMPRCCPTSLANVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPHDQPQGCLCFRRSTGLSDSPQLKSKFE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00639 382 SUPERFAMILY Protein kinase-like (PK-like) 51 341 IPR011009 -
Bva04g00639 382 Gene3D Transferase(Phosphotransferase) domain 1 168 356 - -
Bva04g00639 382 Pfam Protein tyrosine and serine/threonine kinase 70 341 IPR001245 GO:0004672|GO:0006468
Bva04g00639 382 SMART serkin_6 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00639 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 7 365 - -
Bva04g00639 382 ProSiteProfiles Protein kinase domain profile. 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00639 382 CDD STKc_MAP3K-like 74 342 - -
Bva04g00639 382 MobiDBLite consensus disorder prediction 33 55 - -
Bva04g00639 382 MobiDBLite consensus disorder prediction 33 60 - -
Bva04g00639 382 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 7 365 - -
Bva04g00639 382 Gene3D Phosphorylase Kinase; domain 1 56 151 - -
Bva04g00639 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bva04g00639 382 PRINTS Tyrosine kinase catalytic domain signature 269 291 IPR001245 GO:0004672|GO:0006468
Bva04g00639 382 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672|GO:0006468
Bva04g00639 382 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Bva04g00639 382 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00639 Bva-Chr4 4282138 4286286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00639 1 309 MAP Kinase Kinase Kinase AT3G01490 76.353 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva04g00639 PK_Tyr_Ser-Thr 7.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00639 - - gmx:100796762 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00639 04 4282138 4286286 Bva04g00639 04 4282138 4286286 ECH
Bva03g00470 03 2728820 2733276 Bva04g00639 04 4282138 4286286 ECH