Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00635 ATGGCTTCTGCTTCAGTTCCCGCGCTTCCATCTCACATAAAAGCTTGGGTCTACTCTGAATATGGCAAGTCTAGTgatattttgaagtttgataCCAACGTGCCTTTACCTGAAATAAAGGAAGATCAGGTTCTCATCAAGGTAGAAGCTGCAGCCCTCAATCCCATAGATTATAGGAGGTGCGGAGGCTTTTTAAAGGACACCGACTCTCCTCTCCCCACTGCTCCGGGTCATGATGTTGCTGGTGTGGTGGCTAAAGTGGGGAGtcaagtgaagaaattcaaggtAGGGGATGAAGTATACGGTGACATCAATGAGCATGCTTTGAACTACCCAAAAGTTATTGGGTCTTTGGCAGAGTATACCACTGCAGAAGAGAAACTCCTGGCTCATAAGCCACCCAATTTGAGCTTTGTTGAGGCTGCTGCCATTCCTTTAGCAATTGAGACTGCTTATGAAGGCTTTGAGCGAGCTGGGTTTTCTGCTGGTAAATCCATCCTTGTTCTGGGAGGTGCTGGTGGAGTTGGAACCTATGTTATTCAGCTTGCCAAGCATGTTTTTGGTGCTTCCAAGATAGCAGCAACTTCTAGCACCAAAAAACTGGAACTTTTGAGGAACTTGGGAGCCGATTTACCCATTGATTACACAAAGGAGAAGTTTGAAGAATTACCAGAAAAGTTTGATCTAGTGTATGATACAGTGGGGGGGGAGGAGCTTGAGAGGGCATTCAAGGCTGTTAAAGAAGGAGGGAAAGTTGTGACAATAGTACCTCCTGGAAAGCCACCAGCTATTATGTTCATACTCACTTCTACTGGCTCTACCTTGGAGAAACTCAGTCCTTACTTGGAGAGTGGGAAGGTGAAGCCAGTGCTTGATCCCAAGACcccatttccattttctcagACTGTTGAGGCATTTTCCTTCCTGGAAACTTACAGAGCCACTGGGAAAGTAGTTGTCTATCCCATCCCTTG 974 0.4384 MASASVPALPSHIKAWVYSEYGKSSDILKFDTNVPLPEIKEDQVLIKVEAAALNPIDYRRCGGFLKDTDSPLPTAPGHDVAGVVAKVGSQVKKFKVGDEVYGDINEHALNYPKVIGSLAEYTTAEEKLLAHKPPNLSFVEAAAIPLAIETAYEGFERAGFSAGKSILVLGGAGGVGTYVIQLAKHVFGASKIAATSSTKKLELLRNLGADLPIDYTKEKFEELPEKFDLVYDTVGGEELERAFKAVKEGGKVVTIVPPGKPPAIMFILTSTGSTLEKLSPYLESGKVKPVLDPKTPFPFSQTVEAFSFLETYRATGKVVVYPIP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00635 324 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 324 IPR044626 GO:0016628
Bva04g00635 324 Gene3D - 20 320 - -
Bva04g00635 324 SUPERFAMILY GroES-like 11 170 IPR011032 -
Bva04g00635 324 SMART PKS_ER_names_mod 23 320 IPR020843 GO:0016491
Bva04g00635 324 Pfam Zinc-binding dehydrogenase 207 320 - -
Bva04g00635 324 Gene3D - 155 271 - -
Bva04g00635 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 264 IPR036291 -
Bva04g00635 324 CDD MDR_like_2 14 320 - -
Bva04g00635 324 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 1 324 - -
Bva04g00635 324 Pfam Alcohol dehydrogenase GroES-like domain 42 104 IPR013154 -
Bva04g00635 324 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 163 184 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00635 Bva-Chr4 4260210 4262040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00635 73 261 Monolignol Biosynthesis Gene Families AT4G37980 26.728 4.01e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00635 K18980 - gmx:100817947 495.352