Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00633 ATGGAGCACCTTGTAGAGCACATGAGGACCTCATTTCATTCGGTTCACGAACCAACCTGTGGCGTTTGCGGGAAACACTGCAGGTCTTTTGAGTCCCTGAGAGAACATCTTATagGTCCACTCCCAAAACAAGAGTGCAGAGATATTTTTGCCTACCGAGGATGCAAGTTTTGCTTGAAAGTCCTTGATAGCCCTAACGCTCGCAGGGTCCACCAAGAAAGGTGCCAGTTCTCTGGGTTAAATGCGggACTAATTGGTCGCTTTGCTAATTTGGGCATACGTGATAATCTGGGTAGTATTGGCAGAGGGCCACAAGTTGTTGCACTTGCCTGTAAAATGGTTGGTGGTGGCAGTGATGGCTCACTGGATCTCTGTGCAAGGGTCTGCATCATTGATGAACAAGAAAACATCATCTTTCATTCTTATGTCAAGCCACCAATTCCAGTTACAAACTACAGGTATGAGACAACAGGTATTCGACCAGAATACTTAAGGGATGCAATGCCTATGAGACAAGTGCAAAGGAAGATCCAAGACTTCCTTTGCAATGGGGAGCCCATGTGGAAGATTCGCCCAAGGGGTGGAAAAGCCAGGATTCTTGTAGGTCATGGTTTAGATCATGACCTAGAATCATTGCAAATAGAGTATCGAACAGAAATGATCAGGGACACTGCAAAATACCCTCCATTAATGAAAACCAGCAAGCTCAGCAACTCGCTCAAGTACTTAACACATGCATATCTTGGATATGAGATTCAAAACGGAATACAGGATCCATATGAGGATTGTGTTGCAGTAATGAGGCTCTACATGAGAATGAGATCACAAGCACACAGAATAGAGGATTACCCTTTGGCTTCCGATCCACAAAACAGGAATAATTTTGCTTCATGGAGGCAAAGTGAGCTTGAGAGAATGAACCCAGAACAAATGCTGGAAATCTCAAGGTCTGACTACTACTGCTGGTGCTTAGATTCATATAGTGCCTG 989 0.4429 MEHLVEHMRTSFHSVHEPTCGVCGKHCRSFESLREHLIGPLPKQECRDIFAYRGCKFCLKVLDSPNARRVHQERCQFSGLNAGLIGRFANLGIRDNLGSIGRGPQVVALACKMVGGGSDGSLDLCARVCIIDEQENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPMRQVQRKIQDFLCNGEPMWKIRPRGGKARILVGHGLDHDLESLQIEYRTEMIRDTAKYPPLMKTSKLSNSLKYLTHAYLGYEIQNGIQDPYEDCVAVMRLYMRMRSQAHRIEDYPLASDPQNRNNFASWRQSELERMNPEQMLEISRSDYYCWCLDSYSA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00633 329 SUPERFAMILY Ribonuclease H-like 119 274 IPR012337 -
Bva04g00633 329 SMART exoiiiendus 105 279 IPR013520 -
Bva04g00633 329 Gene3D - 103 287 IPR036397 GO:0003676
Bva04g00633 329 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 326 - -
Bva04g00633 329 CDD REX4_like 107 270 IPR037431 GO:0006364|GO:0008408
Bva04g00633 329 PANTHER OS02G0709000 PROTEIN 1 326 - -
Bva04g00633 329 Pfam Exonuclease 124 259 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00633 Bva-Chr4 4244172 4245787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00633 1 326 C2H2 Transcription Factor Family AT3G27970 76.292 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00633 - - aprc:113862359 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00633 04 4244172 4245787 Bva04g00633 04 4244172 4245787 ECH