Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00615 ATGGCTGGGCAATCTGATCCTCAATTCTCGCTATTTTCAGCGGAGGAGcTTGAGTTTATTGCCGAGGACGAGATGGTTGAGATCGTACCCAATCTAAGAATGGAGCCTCTCAATCTTATTTGTGGAGATTTTGGCCCATTTTTCCCCCAGATTGCTACTCAAGTACCTCTTTGGCTTGCTGTAGCTTTGAAGAAGAGAGGAAAGTGTTCTATTCGGCCTCCCGAATGGATGTCTGTTGAAAAGTTGACTCAAGTTCTGGAGGCAGAACGAGAATCTCAAGAGATGTCTGAGCAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTTTTTGACCATGCACGTGATGACATTCAAGATGTATATATGGTAAGGTCTCTAATTGAGGACATCAGAGATGTAAGATTTCATAAAGTTGAGACAGACTTAGAAGCATTTAATGGTCGCACAATTGCTGTCAAGattaaaaatttgtcaGCAATGGAAGTGAATATTGTTCGCCCATTCATTAGAAGATCTCTACAAGCATTTTATAAGCATGATAGTCCAGAATTAATACCAGACCCAGAGAGAGTTTCTGACAGACGTCCACATGCAGTCAACAATGCCCCCAGACGACAACTACGGCGATG 632 0.4114 MAGQSDPQFSLFSAEELEFIAEDEMVEIVPNLRMEPLNLICGDFGPFFPQIATQVPLWLAVALKKRGKCSIRPPEWMSVEKLTQVLEAERESQEMSEQLPFHYVEISRLLFDHARDDIQDVYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRSLQAFYKHDSPELIPDPERVSDRRPHAVNNAPRRQLRR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00615 210 CDD GINS_A_psf2 66 182 - -
Bva04g00615 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 193 IPR007257 GO:0005634|GO:0006260
Bva04g00615 210 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Bva04g00615 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Bva04g00615 210 Gene3D - 12 77 - -
Bva04g00615 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bva04g00615 210 Gene3D - 78 185 - -
Bva04g00615 210 Pfam GINS complex protein 53 162 IPR021151 -
Bva04g00615 210 MobiDBLite consensus disorder prediction 188 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00615 Bva-Chr4 4053704 4057007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00615 1 146 Core DNA Replication Machinery Family AT3G12530 73.288 4.25e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00615 K10733 - gmx:100780528 368.237