Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00607 ATGTCCGAACAGGCCATTATCCATTTAGGAGCAATTGGGTTGCTTGGAGAGTATTTTCCTCCTTCGAGAAAAAAGTACCGTCCCTTGCCTTTTAGAGTTAGCTGCATGCATCCTGAGCCACATCAGGAAATCTCCGAGTCTTTCATCATGGCTTTGCAAAACATTGGTGCTTCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAAAATGATTACCAAAATTGAGGGGAGAGGTAATGGCATCAAAACGAATGTAGTCAATATGGTTGATATTGCAAAGGCATTAGCAAGGCCAGCCTCTTACACGACCAAGTATTTTGGTTGTGAGCTTGGAGCGCAATCTAAATTTGACGAGAAAACTGGAATTTCTCTTGTCAATGGGTCACATGATACTGCAAAACTTGCTGGCCTTCTGGAGAACTTCATCAAGAAATATGTTCAATGTTATGGTTGTGGTAACCCTGAAACTGAGATCATAATTACTAAGACTCAAATGATCCAGCTCAAATGTGCTGCTTGTGGTTTTGTGTCGGATGTGGACATGAGAGACAAGCTGACTACTTTTATTCTGAAGAACCCTCCTGAACAGAAGAAAGGatccaaagaaaagaaggccATGCGAAGAGCTGAAAAGGAGAGGCTGAAGGAAGGTGAAGCAGCTGATGAAGAAGTGAAGAAACTTAAGAAAGAGATTAAGAAGAAAGGCACTACCTCTTCAAAGGATGTCTCCACAAAGTCTAACTCTTCAAAGAAGAAGGCAAATGGCTCTGATGAAGAACGTGTATCACCTTCTCACAGTCAGGTAGATGAGAAAGAGGAGGTTGATGGTGATGATGACGATGTCCAATGGCAAACTGATACATCAGCGGCTGCTGCTCAGCAACGTATCCAAGAACAGCTGAGTGCTGTAACAGCTGGTATGGTCATGCTCTCCACAGATGAGCCAGAGAAGAAGGCAAAAGCAGCAAACAAAGTTAATGGTGGTTCTGAGAATGGTAATTCCATGCCCTATAGTACTTTAATCGAGGAAGTGAaagcaaatttgaagaaaggtGTTACTGCAAAAGAACTGCAATCCTATCTTGCAGAACTTTTTGGATCTGCCCAAGAGAAGATGAATGCTCTGTACGAGGCACTGTTCAATGGGATTGAGAAAGGGTTTGCTAAGGAAGTGGTGAAGAAGAGGAGCTACCTTGCTGCCGCCGTTGCTGCTCAAGAAGAGGGATCGCAGTTGTTATTGCTTGGTGCAATCGAGCATTTCTGTCGCAAGTCCAGTTCTGCTGCTCTGAAGGAGGTTGCTCTGGTTCTGAAGGCACTCTATGATGCTGATGTTTTGGAGGAAGAGTACATAGTGCAGTGGTATCAGGAAGGGCTGAAAGGTGATAATAAGGACTCTCAGATTCGGAAGAATGCTCAGCCCTTCATTGAATGGCTTCAGACTGCTGAATCAGAAACAGAGGAAGAGTA 1472 0.4273 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKEKKAMRRAEKERLKEGEAADEEVKKLKKEIKKKGTTSSKDVSTKSNSSKKKANGSDEERVSPSHSQVDEKEEVDGDDDDVQWQTDTSAAAAQQRIQEQLSAVTAGMVMLSTDEPEKKAKAANKVNGGSENGNSMPYSTLIEEVKANLKKGVTAKELQSYLAELFGSAQEKMNALYEALFNGIEKGFAKEVVKKRSYLAAAVAAQEEGSQLLLLGAIEHFCRKSSSAALKEVALVLKALYDADVLEEEYIVQWYQEGLKGDNKDSQIRKNAQPFIEWLQTAESETEEE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00607 441 Gene3D - 282 433 - -
Bva04g00607 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 441 IPR045196 GO:0003743|GO:0006413
Bva04g00607 441 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Bva04g00607 441 ProSiteProfiles W2 domain profile. 283 441 IPR003307 GO:0005515
Bva04g00607 441 SMART 542_3 348 437 IPR003307 GO:0005515
Bva04g00607 441 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Bva04g00607 441 CDD W2_eIF5 289 439 - -
Bva04g00607 441 SUPERFAMILY ARM repeat 290 435 IPR016024 -
Bva04g00607 441 MobiDBLite consensus disorder prediction 148 224 - -
Bva04g00607 441 Gene3D - 2 104 - -
Bva04g00607 441 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bva04g00607 441 Gene3D - 105 145 - -
Bva04g00607 441 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 441 IPR003307 GO:0005515
Bva04g00607 441 MobiDBLite consensus disorder prediction 143 234 - -
Bva04g00607 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 441 - -
Bva04g00607 441 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00607 Bva-Chr4 3995558 3998582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00607 1 434 Eukaryotic Initiation Factors Gene Family AT1G36730 64.206 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00607 K03262 - qsu:112005579 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00607 04 3995558 3998582 Bva04g00607 04 3995558 3998582 ECH