Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00600 atggaggtGGAAATAGAAATCATTTCTAGAGAAAACATTAAACCTTCTTCTCCAACACCCTCTCACCTAAGAGCCTTCAAACTTTCCCTCTTGGATCATCTCATTCCTGCCCCTTATTCTCCAATGATTCTATTTTATGCCTCACAAGAAGAAAGTGCTGAAAATACCCACTTTGAAACCCTAAAGAGAATTCAATCTCTGAAGCAATCTTTATCAGAGACACTGACCCAGTTTTACCCTCTTGCAGGAAAGTTAAAAGATGATATTTTCATTGAGTGCAACGATGAAGGAGCAAATTTTGTTGAAGCCAGAGTGAAGTGTCCACTTTCTGATATTCTAAGCCAAACAGACCTTATCTTGCTGCACAAGTTTCTTCCCTGTGATCATCTGGTTGTGGAAGAATCAGATTCTGGGGCCTATGTGGCTAATATTCAAGTAAGCACTTTCGATTGTGGAGGAATTGCCATTGGGATATGCATTTCCCATAGGATCCTAGATGGATCTGCATTAAGTACTTTTCTAAAGGTGTGGAAAAGTAGGGCAAAGGGGTGTGAGGAAAATGCAATGTGTCCTAACTTCATAGCAGCTTCTCTCTTCCCCATTGAGAATTTGTGGTTCAAAGACTTGTCAATGGTTATGTGGGGTTCCTTGTTTAAGCAAGGGAAGTTTGTCACAAAGAGGTTTTTGTTCAGTAATTCTGCTCTATCCACACTCAAGAAACAATTAGCAATGAAAAACTCTCTATTACATAACCCTACACGTTTAGAGATAATTTCTGCAATTCTATGGAAGTCTCTTATGGCCATCTCTGAGACAAGATTTGGTACCCAAAGACATTCTTTGGTGACCCATCTTGTGAACCTGCGCAGAAGAATACACAAAGCCCTTTCTCCTCAATATGCCATTGGGAATCTCTTGTGGCTAGCAGCAGCAGAACGCAAGAGTGACAAAGTGACAACATTGGGTGAATTGGTAGGTGAGTTAAGGAAATCAATATCAGAAATTGATGAGAAATTTGTGGAAAGATTGCAAAGTAATGAGGGCAAATCTGTCATGTTCAAATCTCTCAAAAGAATTGGTGAATTGGGGTCAAAAGATGAAGTGGACCACTTTGGGTTTAGTAGTTGGTGCAATTTGGGGTTCTACGAGTTAGACTTTGGTTGGGGAAAGCCCATATGGGTCAGTAGCATTGGTTCAAACGGTGCGTTTTTTATGAACCTAATAATTCTTGTTGACACAAGATTTGGTGATGGCATAGAAGCTTGGGTGACCTTGGATGAGAAGGATATGGCTCATTTGGAAGCTAACGCAGAGCTTGCCACTTATGCAATATTGGATCCAAGTCCTTTGCAACATTTGGTTTA 1364 0.401 MEVEIEIISRENIKPSSPTPSHLRAFKLSLLDHLIPAPYSPMILFYASQEESAENTHFETLKRIQSLKQSLSETLTQFYPLAGKLKDDIFIECNDEGANFVEARVKCPLSDILSQTDLILLHKFLPCDHLVVEESDSGAYVANIQVSTFDCGGIAIGICISHRILDGSALSTFLKVWKSRAKGCEENAMCPNFIAASLFPIENLWFKDLSMVMWGSLFKQGKFVTKRFLFSNSALSTLKKQLAMKNSLLHNPTRLEIISAILWKSLMAISETRFGTQRHSLVTHLVNLRRRIHKALSPQYAIGNLLWLAAAERKSDKVTTLGELVGELRKSISEIDEKFVERLQSNEGKSVMFKSLKRIGELGSKDEVDHFGFSSWCNLGFYELDFGWGKPIWVSSIGSNGAFFMNLIILVDTRFGDGIEAWVTLDEKDMAHLEANAELATYAILDPSPLQHLV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00600 454 Pfam Transferase family 4 439 - -
Bva04g00600 454 PANTHER F21J9.9 6 451 - -
Bva04g00600 454 Gene3D - 1 205 IPR023213 -
Bva04g00600 454 PANTHER VINORINE SYNTHASE-LIKE 6 451 - -
Bva04g00600 454 Gene3D - 221 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00600 Bva-Chr4 3952281 3953804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00600 3 418 Monolignol Biosynthesis Gene Families AT5G48930 23.529 1.04e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00600 - - gmx:100305374 567.385