Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00590 ATGAATTTCAACAAGAGCTCTAAGGCAAACGAAGAGGAGCAGACTGTGGAACTATTCTGGCAACAGCAAATGTTTGATATTGCTCATAATAAAGcGCACAAGAGCCACCACCAATTGCCTTTGGCACGGATAAAGAAGATCATCAAAGCTGATAAGGAAGTCAAGATGGTAAGCACTGAGACACCAATAGTGGTTGGAAAAGCCTGTGAGATTTTCATTCAGGAGCTGACCCTTCGAGCTTGGATGTGCACTGAAGGATGCAAGAGAAGAACTATGCAGAACTGTGACATTGCAAGAGCCATTCAACGCTGTGATGTCCTTGATTTTCTGCGTGAGGTTGTCCCCATTGAGGATCACCATTGCTGTGTTCATAATTCTCAAGATGACAAGGAAGAGAATGCTGCACAATCTGCAGAAGGAACTCAAGTTTTTCCTCCTGGTGATGGGGAACCTTCCATGGAAAACATGGGCAATaaCATGGTGGCCAGAGACCAAGAACAATTTCCTCAGCCTTATTACACGATGCAGCCAACATTTCTGCCCCCATCAAATTTTCCCTACCATCTTCCTCCCAAGGGCGGGGAATGGGATAGTGGAGCTACCAGAAGTTGTGGGAATGGGCTGTttgggaaagaagaaaatggggtAGAAAATATCTCCCACCGTCTCCGAAGATTCAGTATTCTCTGCTTTGTTTTCTCTGTTGTTGCTGTTACTGGCCGTTTGGTTGCCAAGAAAATAGAGCATTCGATTAGAGACCGGCTTGGTTGGCCTCGTGGAGCTGGCGAAGCGTA 794 0.4471 MNFNKSSKANEEEQTVELFWQQQMFDIAHNKAHKSHHQLPLARIKKIIKADKEVKMVSTETPIVVGKACEIFIQELTLRAWMCTEGCKRRTMQNCDIARAIQRCDVLDFLREVVPIEDHHCCVHNSQDDKEENAAQSAEGTQVFPPGDGEPSMENMGNNMVARDQEQFPQPYYTMQPTFLPPSNFPYHLPPKGGEWDSGATRSCGNGLFGKEENGVENISHRLRRFSILCFVFSVVAVTGRLVAKKIEHSIRDRLGWPRGAGEA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00590 264 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 159 - -
Bva04g00590 264 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 7 159 IPR027170 GO:0003700|GO:0006355|GO:0016602
Bva04g00590 264 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 101 IPR003958 -
Bva04g00590 264 Gene3D Histone, subunit A 2 115 IPR009072 GO:0046982
Bva04g00590 264 SUPERFAMILY Histone-fold 32 117 IPR009072 GO:0046982
Bva04g00590 264 MobiDBLite consensus disorder prediction 127 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00590 Bva-Chr4 3859121 3865448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00590 16 115 CCAAT-HAP5 Transcription Factor Family AT1G56170 57.000 5.31e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva04g00590 CBFD_NFYB_HMF 9.8e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00590 K08066 - mnt:21409721 155.221