Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00583 ATGTCGTCATCGAGTTCGTGGACCGCTAAGGACAATAAAGTCTTTGAAATGGCTCTGGCTGTTTATGACAAGGACACTCCTGAACGTTGGCACAAAGTTGCCAAGGCTGTTGGTGGTAAAACTCCAGAGGAAGTGAAGAGGCACTACGAGCTCCTCGTAGAAGACCTTAAGCTTATTGAGTCAGATCAAGTGCCTTCCCCTGATTACAAGTA 212 0.467 MSSSSSWTAKDNKVFEMALAVYDKDTPERWHKVAKAVGGKTPEEVKRHYELLVEDLKLIESDQVPSPDYK 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00583 70 Pfam Myb-like DNA-binding domain 5 49 IPR001005 -
Bva04g00583 70 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Bva04g00583 70 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Bva04g00583 70 CDD SANT 6 53 IPR001005 -
Bva04g00583 70 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Bva04g00583 70 SMART sant 3 55 IPR001005 -
Bva04g00583 70 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 70 - -
Bva04g00583 70 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 70 IPR044636 GO:0003700
Bva04g00583 70 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00583 Bva-Chr4 3829313 3829525 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva04g00583 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00583 - - qsu:112038618 122.864