Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00565 ATGCTCTCCCTTGTCATTctcatcttcttttcttctctccacCATACGACGTCGTTGCCACCGAACGCCACACTCTCTGGGTGCCTCAACACTTTCAGCTGCGGAACTCTTCGCAACATTTCATACCCATTTACCGGCGGTGAACGCCCCTCTTACTGCGGCCCTCCGCAGTTCCACCTGAGCTGCCGCAGTGACTCGCCAGAGTTAAAAATCTCGTCGTTGAGTTACCGGGTCCTCCAACTCGACCAGGATGAAAAAGTTCTCACCTTGGCCCGATCAGACCTTTGGGGTGAAACCTGCACCCGCGAATTCCTTAATTCCAGTTTCGATCTCAACATCTTTAACTACAGTCGTGGCACCGAGGTTCTTAATTTGATGTATGCCTGCATAGCCACTACTGCAATCTGGCCTACGCCGAGTAACCTGTTTTATTGTGAGTTTAATGGAACCCGATACGATTCTTATTCTTTGATTGGACCCGTTCCGAGGGACCCGATTCTCGATTTGGTTAAATGCCATGCTAGTGTTCAGGTGCCAATTTTTGAAAGTGAAGCTAATAGGCTTAAGGGGAATCGCTCATTGCTTAGTGAGGTTTTGATGAAGGGTTTTAACATGAGTTACACGAATCCTTATGATGATGACTGTGCAGAATGTCTCGGTTCGGGTGGTCTATGTGgatttgattctgattttggGATACCCATTTGCATTTGTGGTGATAAATTGTGTCCTGAGTCAGGAAGCAATTCTAAGGGTAAAGTAATAGGTGTTGCTGTAGGAGTTGCGGCCTTTGTCGGCATTCTTCTGGTAGGTTTGCTTTTCCTAGTGTTCCGACGAAGGAAAAGAATTGCTGAGGAGTCCAAAAATAAGGAACTCTTTGTGCCTCATTCAAGTGGAGGCGGCGGTACCTCTACAACTAGCATGTCTAGAAGTGTCCCTTCTTATGCAAGTTCCAATGTTGAGTCTTTGCATAAGAGCTTCTACTTTGGAGTTCAGGTGTTTGACTATGCTGAATTGGAAGAAGCTACTGACAATTTTAACTCTTCTATGGAACTTGGTGATGGAGGTTTTGGCGTAGTTTACTATGGCAAACTCAAGGATGGGCGTGCTGTTGCAGTGAAACGCCTTTATGAAAGCAACTTTAAACGTGTTGAACAGTTCAAGAATGAAATTGAGATCCTAGCAAAACTACGCCATACCAATCTGaacCATGAATTGGTGGAGTTGGTTGATCCATATCTTGGATTCGAAAGAGATCCTGCTATAAGGCGGATGATAACAACAGTTGCAGAACTCGCCTTTAGGTGTTTGCAGCAGGATAGAGACTTAAGACCCTCCATGAATGAGGTTCTTAATGTGTTGAGAGGAATTCAGAAGGATGAGTATGGTCAGCAAGATTCAGAAGTTGTGGATATTAGGGCAGATGAAGTTATCCCTTTGAAAAAGTTCCCTCCCCCACTTTCACCTGATTCAGTTGCTGATAAATGGGTTAGCAGCTCTACTACATCTAATTCCTCATA 1520 0.4368 MLSLVILIFFSSLHHTTSLPPNATLSGCLNTFSCGTLRNISYPFTGGERPSYCGPPQFHLSCRSDSPELKISSLSYRVLQLDQDEKVLTLARSDLWGETCTREFLNSSFDLNIFNYSRGTEVLNLMYACIATTAIWPTPSNLFYCEFNGTRYDSYSLIGPVPRDPILDLVKCHASVQVPIFESEANRLKGNRSLLSEVLMKGFNMSYTNPYDDDCAECLGSGGLCGFDSDFGIPICICGDKLCPESGSNSKGKVIGVAVGVAAFVGILLVGLLFLVFRRRKRIAEESKNKELFVPHSSGGGGTSTTSMSRSVPSYASSNVESLHKSFYFGVQVFDYAELEEATDNFNSSMELGDGGFGVVYYGKLKDGRAVAVKRLYESNFKRVEQFKNEIEILAKLRHTNLNHELVELVDPYLGFERDPAIRRMITTVAELAFRCLQQDRDLRPSMNEVLNVLRGIQKDEYGQQDSEVVDIRADEVIPLKKFPPPLSPDSVADKWVSSSTTSNSS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00565 506 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 3 402 - -
Bva04g00565 506 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 403 506 IPR044652 -
Bva04g00565 506 Gene3D Phosphorylase Kinase; domain 1 317 410 - -
Bva04g00565 506 SUPERFAMILY Protein kinase-like (PK-like) 312 402 IPR011009 -
Bva04g00565 506 Pfam Protein tyrosine and serine/threonine kinase 350 402 IPR001245 GO:0004672|GO:0006468
Bva04g00565 506 MobiDBLite consensus disorder prediction 485 506 - -
Bva04g00565 506 ProSiteProfiles Protein kinase domain profile. 346 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00565 506 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 403 506 - -
Bva04g00565 506 Pfam Wall-associated receptor kinase C-terminal 169 241 IPR032872 -
Bva04g00565 506 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 402 IPR044652 -
Bva04g00565 506 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Bva04g00565 506 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00565 Bva-Chr4 3703816 3706909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00565 28 493 Receptor kinase-like Gene Family AT5G38260 26.434 1.18e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva04g00565 WAK_assoc 2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00565 - - cam:101490779 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00565 04 3703816 3706909 Bva04g00565 04 3703816 3706909 ECH