Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00550 ATGGGGAGTGTTGCCGAAATGAATGATCCTACAGAGAAGACGTCTTCTTGTTTGCCAATAACTGAGAAGAAGACGCAGAGACCTGGTGGTTGCATTGGCATTTTCTTTCAGCTCTTTGATTGGAACAGGAGGCTCGCTAAGAAGAAGCTATTCTCCAAGAAGCTTCTGCCTCCAGCTCGTGCAAAGCAAGCTTCTAAGAAGTTCAAAGGGGATGAGAAAATGCCAAATTCCAAGCTTCATTTGATTGCTAACGAAAACAGTGGAGGTTTCCCAAGTTCTAAGAAATATGGGAATCGTGGTTTAGATGTAGAGCGAAAGCATGAGATGCGAGTTCCAGGTTTGGTAGCAAGATTGATGGGTTTAGAGTCTATTCCAGCTGCACAGCGAGGTAAGTTTAAGAAAGCTTCGTTTTCTGATCCTTGTGTTAATGGGGAGAAGGAGTCTCTGGGTACCCTTTGTGAGTCAGATAGTGAAGAAGGTGTGAATTCTGAAATGGGGGTTGCAAAGAAAGATTCAAGACCTCAAAAGCTTCAGAAAACTGGGAGTTATGAGAGAAAAGCAGTGACCAGGTTCGGAGCTGAGACTTTTCAAATCAAGAGTGTTTTGTCACGAGCAAGAAAACATCATTACCATCATAATCATCCCAAGCTTGTTTCTCCTTTGAAGAGTCCTGGAATTGCTTCTGGAAAGAATGTTTCTCGTAGCTCTAAGTTAATAGGAGCAGCTACTAAGATTTTGGAGCCTGGGTTGCAAGCTACAAGCAGAGCAAAGAATGGTATTACATATTCACATTCCATGTATCTTCCTAAGAACGAAGTTGTGAATGAGGGATTGGGAACTAGTTCAGCAGATCTACAAAATAATTCTGGTTATGAATCCAGTACAGCCATGCCTTTGATGGGGCAAACTTCTTGCAAAAGTTGTGGTAATTTGCTTGATGTTGAAAACTGCAGACCAAATGTGGACAGACAGCCGGCTGTTCTTTATCCTGTTAACTCAGATGTGATCACCGCGTCCTCTATGGTTTCACCACAGGGGAAGGCAAGGCCATTCATGGTCTCCcatgaacaagaaagagatgTTGTCCTTCTGAAAAGTCAGGACCAGCTCATTTCTCTTATTGATGAAGAAGTGGGAAAAAGTAACAATCAGTGTTTGGATGAACCCACTACCAAAATAATGCCTTTGCCTCGTGAATGTCTTGCTCCATGGAATTCATCACGCCAACTATGTGGTACCTTAGAAGATGATACTTATTTGGTTGGCTTCAACCCAAACACTCAGACACAAGAACACATTGTAGGCATTGATAGAGTTTCACCTGGATCCAGAGTATGTAATCAGCAGGTGAAGAGAGTATCATCAACTGCAAACACTGTTGGTGTGACCAAAGATTTTGTGGCTTTGAATAGAACTCTTAGTAGTCAAACTAGGATTAGGTCACCCTCAAAAGTGGATAGTTCCAAGTTCAATCTGGAGAGGAAGCCTTGTATTAGACAGGATGATTCCTCCTCTCGTGCAAGGACATTGGAACGGAAAAGAAGGACCCCAAATGTCACACAAGCTGAAACTACAGCTTCTCTCCATTCAACTACTGCAACACAGAGAAATATTCGTTCTGATGTGCAGGGTGGTAAGAGGGGCCTCAATGCATGCTCAGTGAACATTACTAATGTAAAAAATAGACGAGGTGGTCAgggaaaaatggagaaaataatTGACAATAAGGTCAATAATGTAGtttcatttgcatttaattcCCCCTTGAATCCAAAGGCTGGAGTCCCCACAGAAACAGAAGATAAAAGCACTGATAGGGAGATGAAGACATATTTTCAGAAACCTTCACCCTTGAGAGGAGATGCTTTGGGTGCCTTCCTAGAACAGAAATTGAAGGAATTGACCTCTCAAGAAGATGAGGAGTTGGCTACAGGTGCTCCTCCTAAGAGATCAGCTGCGAAGATTCTTCAAGAGCTAATCTCTGCTCTAAGTGCAGAGCATCTAACCTGTCATGATGGTCAAATGGTCAATTTCGATATCAGTTACCATGATGTGGTGGGAAAAGAGAGGTTTCGGGGGGCTTGCGATTGTAATCATCTCAGTCCTGGATGTGTGCTggatgcttctttttcttctagcAGTCTGGATGAAAGCTCAGTGCACGGATTCCATCCCGGTTCTATGAATTGCCACTATAATCAATTACATCAGTTGGAACCCGATTCCGAGCTTTTAGATTCTGCAACATCATCTAACAAATGGAAGATTGGTATTGAATCTATGGCTGACCTTGTTGACAAAATTTGTAGGATATTACAAAGTGCAAGTTTTTCTGGGGTAAGATTAACAAGAAGCAAGCTCAACCATGTGAAGGATGTTATCTTGGATTCTGAGTTGTTGCTTGGAAATGCAACCATGCACAAGGACGGAGTGCCTCATTTGTTCCTCGTTCGATTTCTCTTTGATGAACTGGACACCCTCACAGATGATGCAATGTGCTTGGATTTAGTTGGAACTGTGGATTTAGAGGACTCTAAGGAGAGATGCCAGCTTAAAGGGTTTCTCTTCGACTTTGTTATAGAATATCTAGAATCGAATTGTTGTCGATATTGTAACTGTGGATTCAGGGCATGGACAAAGTTGCCTCTGTGCATGAAAGCTGATATGTTGATCCAAGAGGTTAAGAGGGAGATTAACAAGTGGGTATGTATAGCTGGTATGAATTTCGACGATATAATAGAATTGGAAATGAGCTACTCCTCCTTGGGAAAATGGGGGAAATGGACAGAATTTGATGTTGAAGCATTTGAGTCTGGTATTGAAATCGGTGGGGACATACTTCAGGTTTTGCTTGATGAAGTTCTTCTAGACCTTGTTGATTGCAAGCAAGACTATATTTG 2900 0.4117 MGSVAEMNDPTEKTSSCLPITEKKTQRPGGCIGIFFQLFDWNRRLAKKKLFSKKLLPPARAKQASKKFKGDEKMPNSKLHLIANENSGGFPSSKKYGNRGLDVERKHEMRVPGLVARLMGLESIPAAQRGKFKKASFSDPCVNGEKESLGTLCESDSEEGVNSEMGVAKKDSRPQKLQKTGSYERKAVTRFGAETFQIKSVLSRARKHHYHHNHPKLVSPLKSPGIASGKNVSRSSKLIGAATKILEPGLQATSRAKNGITYSHSMYLPKNEVVNEGLGTSSADLQNNSGYESSTAMPLMGQTSCKSCGNLLDVENCRPNVDRQPAVLYPVNSDVITASSMVSPQGKARPFMVSHEQERDVVLLKSQDQLISLIDEEVGKSNNQCLDEPTTKIMPLPRECLAPWNSSRQLCGTLEDDTYLVGFNPNTQTQEHIVGIDRVSPGSRVCNQQVKRVSSTANTVGVTKDFVALNRTLSSQTRIRSPSKVDSSKFNLERKPCIRQDDSSSRARTLERKRRTPNVTQAETTASLHSTTATQRNIRSDVQGGKRGLNACSVNITNVKNRRGGQGKMEKIIDNKVNNVVSFAFNSPLNPKAGVPTETEDKSTDREMKTYFQKPSPLRGDALGAFLEQKLKELTSQEDEELATGAPPKRSAAKILQELISALSAEHLTCHDGQMVNFDISYHDVVGKERFRGACDCNHLSPGCVLDASFSSSSLDESSVHGFHPGSMNCHYNQLHQLEPDSELLDSATSSNKWKIGIESMADLVDKICRILQSASFSGVRLTRSKLNHVKDVILDSELLLGNATMHKDGVPHLFLVRFLFDELDTLTDDAMCLDLVGTVDLEDSKERCQLKGFLFDFVIEYLESNCCRYCNCGFRAWTKLPLCMKADMLIQEVKREINKWVCIAGMNFDDIIELEMSYSSLGKWGKWTEFDVEAFESGIEIGGDILQVLLDEVLLDLVDCKQDYI 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00550 966 Pfam DUF761-associated sequence motif 105 129 IPR032795 -
Bva04g00550 966 Pfam Domain of unknown function (DUF4378) 787 953 IPR025486 -
Bva04g00550 966 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 17 960 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 163 180 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 519 541 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 152 182 - -
Bva04g00550 966 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 17 960 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 8 22 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 487 518 - -
Bva04g00550 966 MobiDBLite consensus disorder prediction 475 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00550 Bva-Chr4 3617324 3623071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00550 12 958 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 32.413 1.13e-96 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00550 - - gmx:100813026 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00550 04 3617324 3623071 Bva04g00550 04 3617324 3623071 ECH