Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00542 ATGTACacttcaaagaagaaaatccaTAAGGATAATGATGCTGAGCCAACTGAGTTTGAGGAGACTGTTGCACAGTACCTGTTTGACTTGGAGAACACTAACCAGGAGCTCAAAAGTGACTTGAAGGATCTTTACATCAATCAAGCTGTTCAGATGGATGTTTCTGGAAATCGCAAGGCTGTAGTTATCTACGTGCCCTTCAGATTGAGGAAGGCATTCCGCAAAATTCATCTTCGACTTGTCAGAGAGTTGGAGAAAAAATTCAGTGGCAAGGATGTTGTCGTGGTTGCCACGAGAAGGATCCTGCGGCCACCAAAGAAAGGGTCTGCTGTCCAGCGACCCCGCACCCGAACATTGACAGCCGTCCATGATGCCATGCTTGAGGATGTTGTGCACCCTGCTGAGATTGTTGGCAAACGCGTCAGATACCGCGTTGATGGGtcaaaaatcatcaaaGTGTTCTTGGACCCCAAGGAGCGCAACAACACTGAATACAAGTTGGAAACTTTCTCTGGAGTTTACAGGAAGCTCACCGGGAAGGATGTAGTATTCGAGTATCCAATCGCAGAAGCCTA 575 0.4522 MYTSKKKIHKDNDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAVQMDVSGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVVVVATRRILRPPKKGSAVQRPRTRTLTAVHDAMLEDVVHPAEIVGKRVRYRVDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPIAEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00542 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Bva04g00542 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva04g00542 191 Coils Coil 27 47 - -
Bva04g00542 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva04g00542 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00542 Bva-Chr4 3535362 3537488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00542 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 82.723 1.27e-117 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00542 K02993 - gmx:100500684 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00542 04 3535362 3537488 Bva04g00542 04 3535362 3537488 ECH
Bva03g01824 03 16454649 16456868 Bva04g00542 04 3535362 3537488 ECH