Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00536 atGCAGATGGAAAAAGTGAGCaatgagaaaaatgatgtcttatTATATGGCGATCTAGCCAGGTGGGAACCCTTACGGCTGCTTGCTGAGTTAAGTGACAGCGTTGCATCTCAGATGCCTTTATCGGATGATAAGTACGTGCCAAGAAGCTTTTCTGAAGCTCATCTGAGGGGTAATTTACAGTGGTGGAAAATTGTGACCGATGATGGCCATGAATGGAGAGTTAAGTGCCGTCATGCTGCAAAACGGCGAGCTGAGATAAAACTTGAAGGCGATTGGCTCAACTTTTATGAAAAGAATCAATTGAAGTTTGAAGATGCATGCTTGCTTGAGCTGGTGGAGGGAGAGGagagaactttgaaggttaTATTCTTTCGATCGAGTGATTA 389 0.4036 MQMEKVSNEKNDVLLYGDLARWEPLRLLAELSDSVASQMPLSDDKYVPRSFSEAHLRGNLQWWKIVTDDGHEWRVKCRHAAKRRAEIKLEGDWLNFYEKNQLKFEDACLLELVEGEERTLKVIFFRSSD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00536 129 CDD B3_DNA 46 126 IPR003340 GO:0003677
Bva04g00536 129 SUPERFAMILY DNA-binding pseudobarrel domain 46 126 IPR015300 -
Bva04g00536 129 SMART B3_2 31 128 IPR003340 GO:0003677
Bva04g00536 129 Gene3D - 33 129 IPR015300 -
Bva04g00536 129 Pfam B3 DNA binding domain 38 127 IPR003340 GO:0003677
Bva04g00536 129 ProSiteProfiles B3 DNA-binding domain profile. 30 128 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00536 46 129 B3 DNA Binding Superfamily AT3G18990 32.143 6.22e-07 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva04g00536 B3 3.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00536 - K16588 pop:18098379 45.4394