Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00531 ATGCGGATGAGCTGTAATGGATGCCGGGTCTTGCGAAAGGGTTGTAGTGAGAATTGTAGTATAAGACCCTGTTTGCAGTGGATCAAAAGCCCAGAATCTCAAGCAAATGCTACTGTTTTTCTTGCTAAGTTCTATGGCCGTGCTGGGCTTATGAATCTCATCAACGCTGGTCCTGAACATCTTCGCCCAGcGATTTTTCGTTCTTTGCTATACGAGGCATGTGGGCGGATAGTGAACCCGATTTATGGGTCGGTGGGATTGTTGTGGTCCGGGAGTTGGCAGCTCTGTCAATCCGCCGTGGAGGCTGTGTTGAAGGGCGCTCCGATCACGCCAATTACGTCGGAAGCTGCCGCAAGTGGGCGGGGTCCACCTCTGAAGGCGTACGACATTCGCCACGTGTCAAAGGATGAGAACTCCGCCGCGCCTAACGATCCTCAACGGGTGAAGACTCGGTCGCGAATCAGGCGTGCCGCCGTGAAGTCGAAAGCCAATAAAGGGCCAGCAGAGACCGGGTTAGGGAGTGTTGACGAGGACTCGACGAACGAACCGAGCCAAGTCTGGACCGCTACTGAAGAGTTGGTGAACCGGTCAGGGAGTCATGACTCGTCGCTGAGTCACCAGTCGGAAGCCCTGAACGGAGTGGAGGGTGACAGCAGAGACAGCAAAGAAAGTGAGAACATGATCTCGTTTGAATCAGCTGAACCGGAGACTTCGATGTTCTTCCGAGACGAACCGGGATCTGTAGCGAGGTCGAGTGACCGAGCCGAGGACAGTGGGGATGTTGGTCTCGAGCTGACACTGGGTTTCGAACCGGCATCACGTGCATGTCACGTGGTCCCCGTGAAGAAGAGGAGGCTAGAATTGAGAGAATTTGGTTGTGGCTCGGTTGAGAATGGCACATGCAAGATGGAGCTGGGACTTGAATATTCGGCTTG 935 0.5412 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQSAVEAVLKGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAAPNDPQRVKTRSRIRRAAVKSKANKGPAETGLGSVDEDSTNEPSQVWTATEELVNRSGSHDSSLSHQSEALNGVEGDSRDSKESENMISFESAEPETSMFFRDEPGSVARSSDRAEDSGDVGLELTLGFEPASRACHVVPVKKRRLELREFGCGSVENGTCKMELGLEYSA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00531 311 PIRSF AS2 1 309 IPR017414 -
Bva04g00531 311 MobiDBLite consensus disorder prediction 134 258 - -
Bva04g00531 311 MobiDBLite consensus disorder prediction 174 212 - -
Bva04g00531 311 MobiDBLite consensus disorder prediction 213 229 - -
Bva04g00531 311 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bva04g00531 311 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bva04g00531 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 308 - -
Bva04g00531 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00531 Bva-Chr4 3463511 3464902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00531 1 307 AS2 family AT3G02550 56.869 8.20e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g00531 LOB 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00531 - - mdm:103404890 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00531 04 3463511 3464902 Bva04g00531 04 3463511 3464902 ECH
Bva03g01833 03 16534105 16535515 Bva04g00531 04 3463511 3464902 ECH