Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00495 ATGTTGAGTTCCCAGGAAGAGAACAAGGCAGTGCAGACAAGCTACTTTGATGTGCCTGGTTTGTGTTGCTCCTCCGAGGTTTCTCTCGTTGAAAACATCCTTAAACCTCTCGATGGAGTCAAAGAGGTTTCAGTGATCGTTCCATCACGAACTGTCGTAGTTGTCCATGACGGTGTCGTCGTTTCACAGATTCAAATTGTTAAGGCTCTCAATCAAGCAAGGTTGGAAGCAAGTATCAGAGTGTATGGGGATGAAAAGCACAAGAAGAAATGGCCAAGCTCTTATGCAGTGGcttctggtatttttcttttgctttcctttttaagGTATGTGTACCCTCCCTTAGGGTACCTTGCCCTCGGAGCAGTTGTTGTTGGTGGCTTTTCCATGCTATTAAAGGCCATTGCTTCTATCAGGAACCTTAGGCTTGATATCAACGTTCTCATGACCATTACAGttaTTGGTACAATTGCTGTGAATGATTATTTGGAAGCTGGCACAATTGTTTTTATCTTCACAATTGCTGAATGGCTAGAGTCAAGGGCAAGCTACAAGGCAAGTGCAGCAATGTCTTCGTTGATGAACATAGCTCCTCAGAAAGCTGTGATAGCAGAAACTGGTGAAGTTGTGGACGTTGATAAGGTAGAAATGAACACCATCATCGCCATTAAAGCAGGCGAAGTCATTCCCATTGATGGAATTGTTGTTGAAGGAGACTGCGAAGTCGATGAGAAGACATTGACTGGTGAATCATTCCCAGTACCCAAACACAAGGACTCTACTGTGTGGGCTGGTACTATCAATTTGAATGGTTATATAAGCGTGAAAACTATTGCACTTGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTAGTGGAAGAAGCtcaaaacaacaaaaccaGCATTGAGAGATTGATTGACAAGTTTGCCAAATTTTATACCCCACCTGTTGTAGTTATATCAGCTCTTATAGCTGTGATCCCAGTTGTTCTAGGAGTTCCTAATCGGAGGCATTGGTTCCACTTTGCACTGGTTGTTTTATTGAGTGCCTGTCCATGTGCGCTTATCCTTTCTACGCCTGTTGCAACTTTCTGTGCTTACACAAAAGCAGCTACTTCTGGTCTTCTTATCAAAGGGGGTGAATATCTTGAAACCCTTGGGAAAATCAAGATCATGGCTTTTGACAAAACTGGTACCATAACAAAGGGTGAATTTGTGGTGACAAATTTCCAATCTCTTTCTGAAGATGTTGATTTGAACACATTGCTTTATTGGGTCTCAAGCATTGAGAGCAAGTCAAGTCATCCAATGGCAGCAGCAATTGTTGACTATGGAAGGTCACTCTCTATTGATCCAAAGCCAGAAAGGGTGActgtatttgaaaattttcctgGAGAAGGCATCCATGGTACAATTGATGAGAGAAGTGTTTAtattggaaataaaaagatttccATGAGAGCTGGGTCTGAAACAGTTCCAACCTTACATGGTAGTAATCAAGAGGCAAAGGCTGTTAGCTATGTATTCTCTGGAGCAAACCTCATCGGATTTTTCTCCCTCTCGGATGCTTGCCGGTCGGGGGTTCAGGAGGCAATAGCACAGCTGAAGTTGTTGGGAATCAAGACTGCTATGCTCACAGGAGATAGTCAAGCAGCTGCCAAGCAAGTGCAAGAGCAGATAGGTCATGCTCTGGAGCTAGTCCATGCAGAACTGTTGCcagaagacaaagaaaaaatcatcACAAGATTCAAAACAGAAGGTCACACAGCCATGGTTGGAGATGGTGTAAATGATGCACCTGCATTGGCTACAGCTGATATTGGCATCTCAATGGGCATTTCTGGTTCTGCATTGGCAAGTGAGACAAGCAATATAATTCTCATGTCAAATGACATTAGGAAGATTCCAGAAGCTATCAAGCTTGCAAAAAAATCTCATAGGAAAGTGATAGAgaatgttattttatcaatcGCTTCTAAGGCTGCGATTCTCGGCTTGGCTTTTGCTGGCTATCCAATTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAACATGCTTGTTGGTCATCTTGAACAGCATGCTGCTTTTGCGCGGAGGATCTGATCATGATATTCACCAACAAAATCCAGGGCCTCAACCTGATTATACATCCATTGACATGATTTCAGAAAATGAGCACGTTGAATCTGCCAtggaagagaaggaagaaggtTCTTGCTGCAAAGGCTGTTCAGACCAATCCACAAGATTCAGAGCTTGGTCTGCATTAAAAGGTTGGACTCAAGGGTTGATTACGCGTGGTAAAGATGTTAGCACCTTACAACATCCATTCCTGGAAGAGTTACCCAATTG 2357 0.4094 MLSSQEENKAVQTSYFDVPGLCCSSEVSLVENILKPLDGVKEVSVIVPSRTVVVVHDGVVVSQIQIVKALNQARLEASIRVYGDEKHKKKWPSSYAVASGIFLLLSFLRYVYPPLGYLALGAVVVGGFSMLLKAIASIRNLRLDINVLMTITVIGTIAVNDYLEAGTIVFIFTIAEWLESRASYKASAAMSSLMNIAPQKAVIAETGEVVDVDKVEMNTIIAIKAGEVIPIDGIVVEGDCEVDEKTLTGESFPVPKHKDSTVWAGTINLNGYISVKTIALAEDCVVAKMAKLVEEAQNNKTSIERLIDKFAKFYTPPVVVISALIAVIPVVLGVPNRRHWFHFALVVLLSACPCALILSTPVATFCAYTKAATSGLLIKGGEYLETLGKIKIMAFDKTGTITKGEFVVTNFQSLSEDVDLNTLLYWVSSIESKSSHPMAAAIVDYGRSLSIDPKPERVTVFENFPGEGIHGTIDERSVYIGNKKISMRAGSETVPTLHGSNQEAKAVSYVFSGANLIGFFSLSDACRSGVQEAIAQLKLLGIKTAMLTGDSQAAAKQVQEQIGHALELVHAELLPEDKEKIITRFKTEGHTAMVGDGVNDAPALATADIGISMGISGSALASETSNIILMSNDIRKIPEAIKLAKKSHRKVIENVILSIASKAAILGLAFAGYPIVWAAVLADVGTCLLVILNSMLLLRGGSDHDIHQQNPGPQPDYTSIDMISENEHVESAMEEKEEGSCCKGCSDQSTRFRAWSALKGWTQGLITRGKDVSTLQHPFLEELPN 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00495 785 Pfam haloacid dehalogenase-like hydrolase 390 608 - -
Bva04g00495 785 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Bva04g00495 785 PRINTS P-type cation-transporting ATPase superfamily signature 540 550 - -
Bva04g00495 785 PRINTS P-type cation-transporting ATPase superfamily signature 394 408 - -
Bva04g00495 785 PRINTS P-type cation-transporting ATPase superfamily signature 243 257 - -
Bva04g00495 785 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Bva04g00495 785 PRINTS Cadmium-transporting ATPase signature 16 25 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva04g00495 785 PRINTS Cadmium-transporting ATPase signature 278 292 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva04g00495 785 PRINTS Cadmium-transporting ATPase signature 126 138 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva04g00495 785 PRINTS Cadmium-transporting ATPase signature 259 275 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva04g00495 785 PRINTS Cadmium-transporting ATPase signature 180 200 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva04g00495 785 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 6 700 - -
Bva04g00495 785 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 168 675 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva04g00495 785 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872
Bva04g00495 785 Gene3D - 182 297 - -
Bva04g00495 785 SFLD Haloacid Dehalogenase 377 646 - -
Bva04g00495 785 SUPERFAMILY HMA, heavy metal-associated domain 11 79 IPR036163 GO:0046872
Bva04g00495 785 Gene3D - 8 81 - -
Bva04g00495 785 SUPERFAMILY Calcium ATPase, transduction domain A 208 293 IPR008250 -
Bva04g00495 785 Gene3D - 385 645 IPR023214 -
Bva04g00495 785 ProSitePatterns E1-E2 ATPases phosphorylation site. 396 402 IPR018303 -
Bva04g00495 785 Gene3D - 405 526 IPR023299 GO:0000166
Bva04g00495 785 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 145 699 - -
Bva04g00495 785 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 6 700 - -
Bva04g00495 785 SUPERFAMILY HAD-like 394 695 IPR036412 -
Bva04g00495 785 Coils Coil 286 309 - -
Bva04g00495 785 Pfam Heavy-metal-associated domain 16 70 IPR006121 GO:0046872
Bva04g00495 785 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 388 IPR023298 -
Bva04g00495 785 CDD P-type_ATPase_HM 96 696 - -
Bva04g00495 785 SFLD p-type atpase 377 646 IPR044492 -
Bva04g00495 785 Pfam E1-E2 ATPase 204 372 - -
Bva04g00495 785 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 697 IPR027256 GO:0006812|GO:0016021|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00495 Bva-Chr4 3029257 3035086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00495 8 698 Primary Pumps ATPases AT4G30110 68.786 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00495 K01534 - gmx:100817567 1082.78