Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00476 ATGGACTCTCGCCGAGCTTCACGAGCTCCGATTGACCCAAAGGTTCGTCAAGTTGGATTTTTTGCTCCTGGTGCTCCACCTGAACGGTCCCAGTCGAGTCCACCCGACCcaactttctcttcctcttcttctcctcctgTTGCTGATTCTCCCGCCGGCAACTTACTTTCGCCGGTGATGATCCCGCCGCCGCGCCATGCTTCGGACAATTTACTTCAGCATACCCGTTTGCTTGCATTCCGGACGGCTTCCACTCTCGGGGGTGAATCCATTGCTGGCAGCAGCCATAACAACGCTGAATTCTTCCCTGCTCCTATGTCGCCATCGCCATCGCCGTCACTGGCACCGTCTTCTTACTCGAGCAAGATGGTTGTTGGTGAAGGAGACTTCTTTGATGGAGCGCCATCATCTGGTCGTGGGGCAAGGAGCAATGATGTGAAGGTGGCATCTTCGTTTCCTCGTGGGGGGTTTGACCTATCAGCTATAAAAGTTAATAGTGTGCCGGCGAGTGAATTGACGACTGTATCGGTGGTGAATGTGCCCCTTGGGGTTCCGGaaaaagaaaaggcagaCAAAGGAGGAGGACCAGCAGTGGAGGTGAAAGGTGAAAGACAACCTACAAGTTCAAAACcacagaaagagaaaaccaCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGTGCTGCGAAGGCTGCTGCAAGAGCTGAAGGAAACAAGGCTTCTGGAACAGTGACTGCAGTCAATGCAAAACCAGCTAAAGCTGCAAAGACTCCACAAAAGGTTGATAGTGCTTCAGTTGCAGTCACTGAGAAGAAGGGAGGTGACCGTCCttcagaaaaggaaagaaagaaagatgttCCTCAACCACGTATGCAATATGATGATAAGAGCCGAGTGGAGAAAGCTAAACGACGTGCTGTGGTAAAACAAACTGAAGCTAGAAACAGAGTTGAGTTGTTCAGGCATTTGCCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCAACTGGATCCCATGCATCCTGCTGTTTACAAGGTAGGATTGCAGTACCTGTGTGGAGATGTGTCTGGTGGCAATGCTCGTTGTATTGCGATGCTTAAAGCATTTCAACAGGCCATCAAAGACTACAGTGTTCCACCTGAGAAGACTCTTGGAAGAGACCTTACTGCAAAAATAAGTAGTTATGTTTCATTTCTTATCGAGTGTAGACCTCTTTCAATCAGCATGGGTAATGCAATTAGATTTTTGAAGAGTCGAATTGCCAAGTTACCTTTGACTCTGTCTGAGTCAGAAGCAAAAACTTTGCTTCAGTCAGATATTGACCGTTTTATAAATGAGAAGATAATACTTGCCAACAAGGTAATAGTCAAGCATGCAGTGACAAAAATAAGAGATGGTGATGTTCTTCTCACTTATGGATCGTCATCAGCAGTTGAAATGACACTGTTACATGCACATGATCTAGGAAAACAGTTCCGTGTTGTGGTTCTTGACTCCCGTCCACAGCTTGAAGGACAACTTTTACTTCGTAGGCTGGTGGAAAAGGGTCTCACCTGTACTTACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACCTGGGTTTTTTTGGGTGCTTCATCTGTGTTGTCTAACGGAACTGTTTATTCGAGAGTAGGCACTGCATGTGTTGCAATGGTTGCTCATACATTCCGTGTGCCTGTTATAGTGTGTTGCGAGGCTTATAAATTTCACGAAAGGGTGCAGCTTGATTCAATATGCTCAAATGAACTAGGTGATCCAGATGCCATTTCAAAGATTCCAGGTAGAGAGGAAATCAACTACTTGAATGGTTGGGCAAATTCTGAAAACCTGCAACTTCTGAATTTGATTTATGATGCAACACCTTCAGATTATGTGTCAATGGTCGTCACAGATTATGGCATGGTTCCTCCTACAAGCGTGCCTGTGATTGTAAGAGAATATAGTAGAGAACAGCTATGGATATA 2018 0.4381 MDSRRASRAPIDPKVRQVGFFAPGAPPERSQSSPPDPTFSSSSSPPVADSPAGNLLSPVMIPPPRHASDNLLQHTRLLAFRTASTLGGESIAGSSHNNAEFFPAPMSPSPSPSLAPSSYSSKMVVGEGDFFDGAPSSGRGARSNDVKVASSFPRGGFDLSAIKVNSVPASELTTVSVVNVPLGVPEKEKADKGGGPAVEVKGERQPTSSKPQKEKTTKAERRALQEAQRAAKAAARAEGNKASGTVTAVNAKPAKAAKTPQKVDSASVAVTEKKGGDRPSEKERKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDPMHPAVYKVGLQYLCGDVSGGNARCIAMLKAFQQAIKDYSVPPEKTLGRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKTLLQSDIDRFINEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMTLLHAHDLGKQFRVVVLDSRPQLEGQLLLRRLVEKGLTCTYTHINAVSYIMHEVTWVFLGASSVLSNGTVYSRVGTACVAMVAHTFRVPVIVCCEAYKFHERVQLDSICSNELGDPDAISKIPGREEINYLNGWANSENLQLLNLIYDATPSDYVSMVVTDYGMVPPTSVPVIVREYSREQLWI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00476 672 MobiDBLite consensus disorder prediction 274 309 - -
Bva04g00476 672 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 672 - -
Bva04g00476 672 MobiDBLite consensus disorder prediction 34 50 - -
Bva04g00476 672 MobiDBLite consensus disorder prediction 181 309 - -
Bva04g00476 672 MobiDBLite consensus disorder prediction 1 68 - -
Bva04g00476 672 SUPERFAMILY NagB/RpiA/CoA transferase-like 347 665 IPR037171 -
Bva04g00476 672 MobiDBLite consensus disorder prediction 206 227 - -
Bva04g00476 672 Gene3D - 458 665 IPR042529 -
Bva04g00476 672 Pfam Initiation factor 2 subunit family 363 655 IPR000649 GO:0044237
Bva04g00476 672 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00476 Bva-Chr4 2843068 2849976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00476 1 672 Eukaryotic Initiation Factors Gene Family AT5G38640 65.116 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00476 K03680 - gmx:100785938 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00476 04 2843068 2849976 Bva04g00476 04 2843068 2849976 ECH
Bva03g01858 03 16810382 16817353 Bva04g00476 04 2843068 2849976 ECH