Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00444 ATGATATCAACGACCTGCAGTGAGTACAGTGAGGTTTTCCAAGGATGCAGTAATCGTAGAAGAAAACTAAGGGtgctatttttgttgtttcagCTCACAGTGgaGGTCATACAAACCTTGCCAATTCATCTTCCACCGTGGCTTCTTTGTAATAGGCTTGAAACAGCAAGATTACAGGAATATATACAGCtatttaagaaaaggaaaatggaatATCCGATTGCACTCGCAACAGGAGTGGTGGCAAAGATAGGAGAATCCTTGGCGGAGCCAATCATAAGCCAGGTGGGATATTTGATTTACtgcaacaaaaatatcaacaatCTTAAGAGTGAGCTCAAAAAGTTGGAAGGGAGGAAATGTGGAGTGCATGGGATGGTGGTTGCAGATAGAAGGAATGGACGTCAAATTGCACCTACCGTGGAAGATTGGCTGAGCAAAGTGAGCAACATTGAAAATGAGTTACAAGGCTTCTACAAAGATGACGAAGTCAACAAAAGCATTAAGTGTCTTGGTGGGTGGTGTCCTAATTTGGCGTCTCGCTATTCTTGGAGCAAGAAAGCGAAAAAGAAGATGGTAGATGTTATGAGCCTAAAGGAAGAGAAACTTGAGATCATATCCTACCCTTCTCCTCCTTCAAGACTTGGATCTACCTTCACAAATCACATCAAGAGCTTTCAATCTAGAAAGTTGGTGATGGTGGAGGTCATAGACGAACTGAAGGATGACGAGTTCAAAAGGATAGCCATTTGTGGCATGCCTGGTGTGGGAAAGACCACGTTTGTGAAAGAAATGGTTGGaattatagaagaaaataagctGTTTGATGAAGTTGTCATGGCAGTGGTATCCCAAAATCCGGATTACGGAAAGATCCAAGGCCAAATTGCTGATGCGTTAGGCTTGAAATTTGATAAGGAGACTGTACAAGGAAGAGCATGCCAACTTCTTGATAGATTGAAACATATTAGTAGTGTGTTGATAGTgcttgatgatgtttggatgGAACTTGATTTTGAATCTATCGGGCTTCCTTCCATTGAGCATCACAAGGGTTGTAAGATTTTATTCACATCAAGAAACGAAGATGCATGTCACAAGATGGGAAGCCAAAAGAATTTCACTATCCCTATCCTCTCTCAAGATGAAGCTTGGGATTTTTTCATGGAGATTGCAGGTCCTGATGATGTTGCTGACAAACCAGACATCCAGCATATTGCTAAAGAAGTTGCAAAAGAATGTGGGGGCTTGCCACTAGCTATTGTCACCATAGCAAAAGCACTGGCAAACAAAGAGAGGCATATGTGGGAGGATGCGCTTGATCAACTAAGAAAGTCTTCAGTGACATCCTTCTCAGAAATGAAGGATTCAGTATATTCATGTATTGAGCTGAGTTATAACTCTCTGGGCAatggagaaataaaatatctccTTCTACTTTGCTCCTTCTTCCCAGAAGACTTTGACATTCCAATTGAAGTTTTACTTAGGCATATGGTGGGGTTAGGATTGTTTAAAGGCATTGATGCATTATGGAAAGTAAGGAATAGAGTGCATACCTTGGTGGACAAGCTAAAGAGTCACTTCATGTTGCTTGAGAGCAATAAGGAAGAGAGTGTCAAAATGCATGACGTTGTTCGTGATGTTATGATATCAATTGCATCTAGAGAAGAAGTCTCGTGGTGTCATCATAGCAGCGCAATCTCATCCGATGACTTAGAATGTCAAAATCTTAAGTTTTTACAAGTGGCTGTGAAGAAAAGGGAAGCAATCTCCAAAAATTTCTTCCAAGGCATGCATGAACTCATGGTGTTAGGTCTAGAAAATATGACTATTTCATCAATGCCATCTTTGTTCCAAGCCCTGGACAATCTCCACACCTTAAGATTAGAAGGTTGTCATGTTGGAGAAACATCTGTAATTGGCAAACAACTGAGGAAACTTGAAATCCTAAGCTTTGCTCACTCAGATATCAAATGTTTGCCCATAGAAATAGGGCAACTAAGCTTGCTAAGATTGTTGGATTTGACAGAGTGCAATAATCTTACCCAAATTTCCTCTAATGCTTTGGCAAGCTTGTCAAGGTTAGAAGAACTTTATCTAAGAGTGAGGAATTTTTTTACTGAGGAAAACAATTCCTTTCTCATGGGTGAGTTGCAATCTTTGTCTCATCAGCTGAAGGTTCTGGAGACTGCAGTTCTCGGGGTTGAAGCTTTGCCCAATAACATGGTCTTCAAAAACATTGTAAGGTTTTGGGTTTATGTGGAAGACTCATCTGCACTTTATGGTGGTCTTGTTCGTAGGGGATATATGCACCCAAACATTTTGAAGctcactaatatatattacaacaATATCAAGAAGAGTGAGACAATTCGACACTTGATTAAGAAAGCTGAGATTCTCAACTTAGTTGATTTGAAGCACTTGAAAAATGTGGTCTATGAATTAGACAAAGAGGGTTTTCCATGTTTGAAAAATCTAAGTGTAGGGTTCTGCAATAATCTAGAGTATGTGGTAGATGCAAGATGTTGCAGTTCTCCATCTTCTGTCTTTCCCCTGGTTCAGTCATTGTCTCTTCACAGTCTAGACAATTTGAAAGAGATATGTTATGATAGTCAAGTGCTTCACTTGGCAAAGGGAATCACTTGGTTCCAATGCTTTGGCAACCTAAGGGATCtcaaaatagaattttgtaCCAAGCTTAAGAGTGTTTTCTCACTATCTTCAAGCGCAAGTTTGGCAGGACTTCAAAGCTTGCTTGTATCTGAATGTTATGGGATTGAATGTATCATCTTAAACAATATGGAAGAGGATGATGAATTAGTGattgagttttcaaatttgattgagTTGAAGCTGCAAGAACTTCCAAGCTTGATCGGATTCACTAAAGCCACTGTGATGGACAAGTCACATTCATCAAAACCCCAAGTTCAGGAGCAAAGCTATAGCCAATTAGTTGAGAGAACAGTGGTTGAAGATGGGCAGTTTTTATTTGGATCAGATTCAGAATCTGTTGCTGATATATCTAACGCAACCCGCGGGGTGCTGTTTAAATCTACTTGGATGTGGAAATTCCCAAATTTGGAAAAGATTTGGTTATGCGAATGCTCTTCACTGGACATGGTGTTTGACTTGCAAGAATCAAAGTTTGATAACCAGTCAGTTGCTGTATTCTTTGCTCcgttgaaagaaataaagttatCTGGGCTTCCTAAGCTAAGACACATTTGGGGTAATGTTCGACCTCACATTCAAGGCTTTGAGAACTTGAGAACACTCAAAATTAGTAAGTGTGattctttgaaatatttgctCACTTCTACCATTGCCAAGGCACTCACACAGCTTCAGGAAATGGCGATACAAAGCTGCCAATTAATGGAGAAAGTTGTTGGGAGAGAAGTGGATGAAAAtggtgaagaagaaaaggagaaaatagaaACTCTTGTGTTTGATAAATTAGATTCCTTGATGCTTAAAGACCTTCCGGGCCTCGTCGGAATTTCTTCAGATTCTTATAAGCTGGTGTGGCCATATTTGAGATGCTTATGCATTGATGGATGCCCCCAGCTGAAGACATCTCCTAACCCAATTCAAATCCCTTCAGACCAGGAGAATCTGAATGAACCATCAAATTCAACCATTCATGATGGTGGCTTTTGCACTTCTTCTGATGAGGAGTCCTCAAGGTTTATGCAGCGGTGCTTTGGATGCACTGGATTTCATGCATTTTCGAACACAGTGGCAGAGGCTGTGTCAACATATGATCATCTCCCTTCTGTTAATGAAGTGAATACCAAAGCAGAAACACAATCCAGCATGCCAGTTCTCGAACAACTTCAGTTAAAAGGATTGGATTCATTAGATGTCATATTCCAGCTTGAACAGAAATGCCATTCTAGTCAAACACTTAATTGTTTGGTGAAACTGATGCACATGTCGAGAAGTTCACTACGAGTCACTGGCTTCAACAACCTCACACTGATAAGCTTGGATGCTTGTCTCAGGTTGCAATATGTATTCTCATATTCCATAGCAAAACTTCTTGTGAAGTTACAGGAAACCAAAATCTCCAACTGTAAGATGGTGGAGCAACTTgtcaaaagagaaggagaagacaGATTAATTGAGTTTCATGAATCAAATTCTCTCAAAGAACTCAAGGTTTCTCAACAAAGTCATGCGACCATCTCTAAAGAGACGTTTGCTTTAGAATGGCCATCCCTGAAAAGAATCAGTATTGTTAACTGCAACATTCTTGAAGTTGTCATTGTTAAAGAAGAGGGAATAGATATGGCTTCATTTGCTCAAGTACAATCTCTCATGTTGAGTCATCTATCAAATCTTGTGAGCTTTTGCCACCCACCTGGCACAGAACTGCAAGAACCACTCTTGGAGGATTCCCAGGGTGCATGTAACGATGCTTGGAGAAAGATGAGGCATGGTCCTCTTATAGATGGCTTCTTATTTCCAAATCTGAGATACCTAGCAATAGTGGGATGCAATAGAATCTGTGCTTTGTTCTCTCCTTCATCATCGGCAAGTCTGGTGTGTCTGCAAGAGCTGGAGATACGTGATTGCGAGAACATTAAAGAAATTGTAACTAAAGAGGAAACTCAACCATGGGTAAACAAGATTGTGTTCCACAAATTGCACCATCTGAAGCTGGAACGCCTTTCAAATCTCTGCGCTTTCTGTCAGGGTTCTTATGACTTCGATTTCCCATCATTGCAAGTGGTCATCTTTGGAAATTGTCATATGATGGAATTATTCTCATATGGTTCTTCATACACTCCGAAGCTAGAGAATGTAACCATGGAGattgaacaaattaataaaattatatcgaTCGGAGATCTTAATGCTGCTGCACAACTATCCAAAGGAATTCTGACATTGCAAACAGCTGAGACACTCAGATGGATTGAGCAGGATAAAGGCTTACTTGGCTACTTCACCAAAGAAACAGATATGACTGTTCAGGACCTTCAAAGACTGCTGAGTCTTGTTCCATCTAATGCAATAGACATATTTCAACATCTAAAGCAACTCACTGTAAAAAGTTGTAGTTCTTTGCTCGAGTTGTTTGAATCAGGAGGGGATGTGCAGAAAGGGATTACCAAGATACAATATGAGCTAGAAGTGATGAATTTGTATTCTCTACCAAAATTGAGACATATATGGAACAACCTTGGTGGGGTTTTAAGGTTTGAGAAGCTAAGGATACTAAAAGTTGAATACTGCGGCAGCTTGAAGAGCACTCTCTCTCCTACCCTAGCGAGAAACCTTGTGCAACTTCAACACCTTAGGGTATATGGTTGCCAAATGATGGAGGAGATAGTCACAAAGGAAGATAAGGGAACTGTAGAAGATAGTAAGGCTAAGATTTTATTTCCAATGTTGAACAAGCTGGAGCTTCGTCATCTTCCCAACCTCAAATGTTTCTGTCCAGGAATTTGCAACTTTGAATTCCCATCCTgtgaagaaataataattgaaaagtgCCAAAACATGACAACCTTTTCCCAGGGAACTGTGAGCACACCAAAACTTCCCCATATATACATAGGGCCATGTGAATACGTAGACGTGATGGGAGACCTCAATATGACCTTTTACTATCATGCTCATTCAGAAAATTTCAAGATGGCACTCCAAAGATCAGATACAATCAGTTGGATAGAGCAAGATGAACACTTACTTGGCTATTTAAAAAGAGTAACAGAGCTGGCCATTGAAGGATGTGAAAGACTGCTAAATTGTGTTCCATCAAATATGATACATAGGTTCCAACACCTGAAACTACTCAAAGTACGAGAATGTGCTTCCCTTGTTGAGATTTTTGAATCAAAGCAGGTGGATACAAATGAAGGTCATGATTCGAaggtttataattataatctacAAGAAATGCATTTGTATTCTCTAACAAAGCTGATGCACTTATGGAGAAATCTTGGTGGAGTAATCTTGGGCTTTCAGAATCTAAAAAAGCTGTATATTGGGCGCTGTGATGAATTAAAAAGTGTGTTCTCTCCTTCCTCAGCTAGAAGCTTGCTGCAACTTCAGGAGCTATCAATATATGAATGTGAGATGATGGAGGAGATTGTCTCAATTGAGGATGATAGAATATCTGAAGAATCAAACCAAGCTAAGATTATATTCCCAGCCTTGCAGTCTTTGACACTTTATAATCTCCCCAACCTTAAATGTTTCTGTTCAACAACTTACAATTTTCAACTACCACTTTGTCGTGACATAACTATCAAAGAATGCTCAAATATGGAGACTTCTTGTTATGGAACAAAGAGCACACCGGAATTCTTTAGGTA 6338 0.3823 MISTTCSEYSEVFQGCSNRRRKLRVLFLLFQLTVEVIQTLPIHLPPWLLCNRLETARLQEYIQLFKKRKMEYPIALATGVVAKIGESLAEPIISQVGYLIYCNKNINNLKSELKKLEGRKCGVHGMVVADRRNGRQIAPTVEDWLSKVSNIENELQGFYKDDEVNKSIKCLGGWCPNLASRYSWSKKAKKKMVDVMSLKEEKLEIISYPSPPSRLGSTFTNHIKSFQSRKLVMVEVIDELKDDEFKRIAICGMPGVGKTTFVKEMVGIIEENKLFDEVVMAVVSQNPDYGKIQGQIADALGLKFDKETVQGRACQLLDRLKHISSVLIVLDDVWMELDFESIGLPSIEHHKGCKILFTSRNEDACHKMGSQKNFTIPILSQDEAWDFFMEIAGPDDVADKPDIQHIAKEVAKECGGLPLAIVTIAKALANKERHMWEDALDQLRKSSVTSFSEMKDSVYSCIELSYNSLGNGEIKYLLLLCSFFPEDFDIPIEVLLRHMVGLGLFKGIDALWKVRNRVHTLVDKLKSHFMLLESNKEESVKMHDVVRDVMISIASREEVSWCHHSSAISSDDLECQNLKFLQVAVKKREAISKNFFQGMHELMVLGLENMTISSMPSLFQALDNLHTLRLEGCHVGETSVIGKQLRKLEILSFAHSDIKCLPIEIGQLSLLRLLDLTECNNLTQISSNALASLSRLEELYLRVRNFFTEENNSFLMGELQSLSHQLKVLETAVLGVEALPNNMVFKNIVRFWVYVEDSSALYGGLVRRGYMHPNILKLTNIYYNNIKKSETIRHLIKKAEILNLVDLKHLKNVVYELDKEGFPCLKNLSVGFCNNLEYVVDARCCSSPSSVFPLVQSLSLHSLDNLKEICYDSQVLHLAKGITWFQCFGNLRDLKIEFCTKLKSVFSLSSSASLAGLQSLLVSECYGIECIILNNMEEDDELVIEFSNLIELKLQELPSLIGFTKATVMDKSHSSKPQVQEQSYSQLVERTVVEDGQFLFGSDSESVADISNATRGVLFKSTWMWKFPNLEKIWLCECSSLDMVFDLQESKFDNQSVAVFFAPLKEIKLSGLPKLRHIWGNVRPHIQGFENLRTLKISKCDSLKYLLTSTIAKALTQLQEMAIQSCQLMEKVVGREVDENGEEEKEKIETLVFDKLDSLMLKDLPGLVGISSDSYKLVWPYLRCLCIDGCPQLKTSPNPIQIPSDQENLNEPSNSTIHDGGFCTSSDEESSRFMQRCFGCTGFHAFSNTVAEAVSTYDHLPSVNEVNTKAETQSSMPVLEQLQLKGLDSLDVIFQLEQKCHSSQTLNCLVKLMHMSRSSLRVTGFNNLTLISLDACLRLQYVFSYSIAKLLVKLQETKISNCKMVEQLVKREGEDRLIEFHESNSLKELKVSQQSHATISKETFALEWPSLKRISIVNCNILEVVIVKEEGIDMASFAQVQSLMLSHLSNLVSFCHPPGTELQEPLLEDSQGACNDAWRKMRHGPLIDGFLFPNLRYLAIVGCNRICALFSPSSSASLVCLQELEIRDCENIKEIVTKEETQPWVNKIVFHKLHHLKLERLSNLCAFCQGSYDFDFPSLQVVIFGNCHMMELFSYGSSYTPKLENVTMEIEQINKIISIGDLNAAAQLSKGILTLQTAETLRWIEQDKGLLGYFTKETDMTVQDLQRLLSLVPSNAIDIFQHLKQLTVKSCSSLLELFESGGDVQKGITKIQYELEVMNLYSLPKLRHIWNNLGGVLRFEKLRILKVEYCGSLKSTLSPTLARNLVQLQHLRVYGCQMMEEIVTKEDKGTVEDSKAKILFPMLNKLELRHLPNLKCFCPGICNFEFPSCEEIIIEKCQNMTTFSQGTVSTPKLPHIYIGPCEYVDVMGDLNMTFYYHAHSENFKMALQRSDTISWIEQDEHLLGYLKRVTELAIEGCERLLNCVPSNMIHRFQHLKLLKVRECASLVEIFESKQVDTNEGHDSKVYNYNLQEMHLYSLTKLMHLWRNLGGVILGFQNLKKLYIGRCDELKSVFSPSSARSLLQLQELSIYECEMMEEIVSIEDDRISEESNQAKIIFPALQSLTLYNLPNLKCFCSTTYNFQLPLCRDITIKECSNMETSCYGTKSTPEFFR 2112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00444 2112 PRINTS Disease resistance protein signature 414 428 - -
Bva04g00444 2112 PRINTS Disease resistance protein signature 320 334 - -
Bva04g00444 2112 PRINTS Disease resistance protein signature 666 682 - -
Bva04g00444 2112 PRINTS Disease resistance protein signature 247 262 - -
Bva04g00444 2112 Gene3D Ribonuclease Inhibitor 558 973 IPR032675 -
Bva04g00444 2112 PANTHER - 1081 1211 - -
Bva04g00444 2112 PANTHER RPP4C3 92 852 - -
Bva04g00444 2112 Gene3D Ribonuclease Inhibitor 1247 1649 IPR032675 -
Bva04g00444 2112 PANTHER - 1995 2108 - -
Bva04g00444 2112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 481 IPR027417 -
Bva04g00444 2112 SUPERFAMILY L domain-like 541 1203 - -
Bva04g00444 2112 SUPERFAMILY RNI-like 1492 1779 - -
Bva04g00444 2112 Coils Coil 99 119 - -
Bva04g00444 2112 PANTHER - 1492 1624 - -
Bva04g00444 2112 PANTHER RPP4C3 884 965 - -
Bva04g00444 2112 PANTHER RPP4C3 1318 1457 - -
Bva04g00444 2112 PANTHER RPP4C3 1739 1872 - -
Bva04g00444 2112 SUPERFAMILY RNI-like 1898 2099 - -
Bva04g00444 2112 Pfam NB-ARC domain 234 467 IPR002182 GO:0043531
Bva04g00444 2112 Gene3D - 379 464 IPR042197 -
Bva04g00444 2112 SMART AAA_5 244 395 IPR003593 -
Bva04g00444 2112 PANTHER RPP4C3 1492 1624 - -
Bva04g00444 2112 PANTHER RPP4C3 1995 2108 - -
Bva04g00444 2112 PANTHER RPP4C3 1081 1211 - -
Bva04g00444 2112 SUPERFAMILY RNI-like 1026 1426 - -
Bva04g00444 2112 PANTHER - 884 965 - -
Bva04g00444 2112 PANTHER - 1318 1457 - -
Bva04g00444 2112 PANTHER - 92 852 - -
Bva04g00444 2112 PANTHER - 1739 1872 - -
Bva04g00444 2112 Gene3D - 465 552 IPR036388 -
Bva04g00444 2112 Gene3D Ribonuclease Inhibitor 1021 1213 IPR032675 -
Bva04g00444 2112 Gene3D Ribonuclease Inhibitor 1894 2108 IPR032675 -
Bva04g00444 2112 Gene3D Ribonuclease Inhibitor 1659 1858 IPR032675 -
Bva04g00444 2112 Gene3D - 215 376 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00444 Bva-Chr4 2644284 2654512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00444 230 557 WRKY Transcription Factor Family AT5G45050 24.706 8.76e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00444 - - vra:106757704 2150.55