Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00431 ATGGGGATAGCAAGAAGAGAAACTGTTCTGTGTTTTGTGGCATTTTTCTGGTTTTGGAGTTCTTCAAATGCTTTGCTTTCCCCTAAAGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGCATCAAAGAATCTCTTGTGGATCCTCATGGTGTTTTAGAaaattgggatggggatgctGTTGATCCATGTAGCTGGAATATGGTAACTTGTTCTCCCGAGAACCTTGTGATTGGCCTGGGCACTCCCAGTCAAAGTTTATCTGGTACTCTATCTGCAAGCATAGGCAATCTAAGAAACCTTCAGATTGTGTTGCTGCAGAATAACAACATTTCAGGACCAATTCCTTCAGAGCTGGGCAGGCTTTCCAAGCTTCGCACACTTGATCTTTCTAATAACTTCTTCAATGGGGAAATTCCTCCCTCTCTGGGCCACTTGAGAAGCCTCCAATACCTGAGGCTCAATAACAACAGTATTTCTGGGCAATGTCCAGAGTCACTGGCTAACATGACACAGCTTGCTTTTCTTGACTTGTCCTTCAACAATATAAGTGGCCCTGTACCTAGAATTTTGGCTAAATCATACAGCATTGTTGGAAACCCCCTTGTCTGTGCTActggaaaagaaacaaattgccATGGAATGACACCGATGCCTATGTCTATGAACTTAAACACTACCGAGGATGCTCTGTCTTCTGGAAGACCACAGACTCACAAAATGGCCATTGCCTTTGGCTTGAGCCTTGGATGCCTCTGCCTTATTGTTGTTGGTTTTGGACTATTTCTGTGGTGGAGGCATAAGCGTAACCAGCAGGCATTCTTTGATGTTAAAGACCGGCATCATGAAGAGGTGTACCTTGGAAATTTGAAGAGATTCTCGTTCAGAGAACTCCAATTTGCTACTCACAACTTCAGCAGCAAAAACATACTTGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCCCAGATGGCACTCTTGTAGCTGTCAAAAGGCTAAAGGCTGGCAATGCCATTGGTGGAGAGATTCAATTTCAGACTGAAGTAGAAATTATCAGCTTGGCAGTACACAGAAACCTCCTCAGACTATATGGATTCTGCATGACACCCACAGAAAGGCTTCTAGTTTACCCATACATGTCTAATGGCAGTGTAGCTTCACGTCTCAAGGGTAAACCAGTGCTGGACTGGGGCACTAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGACTGCTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTAAAAGCTGCCAATATATTACTAGATGACTATTGTGAGGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACTGTGGGGCATATAGCCCCTGAGTATCTTTCCACAGGACAATCCTCTGAAAAGACTGATGTTTTTGGATTTGGCATTCTCCTCCTTGAATTGATCACAGGCCAGAGGGCACTAGAATTTGGAAAAGCAGCTAACCAAAAAGGAGCCATGCTTGATTGGGTGAAGAAACTTCATCAAGAGAAACAGCTTAAGTTGCTTGTAGACAAGGATCTAGAAAGCAACTATGATGGGATTGAGCTTGAAGAAATGGTTCAAGTGGCTCTACTATGCACTCAATATCTTCCAGGCCACAGGCCAAAAATGTCCGAAGTAGTACGCATGCTTGAAGGGGATGGACTAGCAGAAAGATGGCAAGCTTCTCAAAGAGCTGACACAAGCAAGTGCAAACCCCATGACTTCTCTTCTTCTGATCGATATTCAGATCTTACTGATGACTCTTCATTACTGGTTCAGGCCATGGAACTTTCAGGTCCAAGATG 1874 0.4296 MGIARRETVLCFVAFFWFWSSSNALLSPKGVNFEVQALMGIKESLVDPHGVLENWDGDAVDPCSWNMVTCSPENLVIGLGTPSQSLSGTLSASIGNLRNLQIVLLQNNNISGPIPSELGRLSKLRTLDLSNNFFNGEIPPSLGHLRSLQYLRLNNNSISGQCPESLANMTQLAFLDLSFNNISGPVPRILAKSYSIVGNPLVCATGKETNCHGMTPMPMSMNLNTTEDALSSGRPQTHKMAIAFGLSLGCLCLIVVGFGLFLWWRHKRNQQAFFDVKDRHHEEVYLGNLKRFSFRELQFATHNFSSKNILGKGGFGNVYKGVLPDGTLVAVKRLKAGNAIGGEIQFQTEVEIISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKLHQEKQLKLLVDKDLESNYDGIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWQASQRADTSKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00431 624 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515
Bva04g00431 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Bva04g00431 624 MobiDBLite consensus disorder prediction 590 604 - -
Bva04g00431 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Bva04g00431 624 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00431 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 4 624 - -
Bva04g00431 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Bva04g00431 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Bva04g00431 624 SMART LRR_typ_2 121 144 IPR003591 -
Bva04g00431 624 SMART LRR_typ_2 145 168 IPR003591 -
Bva04g00431 624 SMART LRR_typ_2 169 192 IPR003591 -
Bva04g00431 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 624 - -
Bva04g00431 624 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00431 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Bva04g00431 624 SUPERFAMILY L domain-like 34 196 - -
Bva04g00431 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Bva04g00431 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Bva04g00431 624 MobiDBLite consensus disorder prediction 584 606 - -
Bva04g00431 624 ProSiteProfiles Protein kinase domain profile. 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00431 Bva-Chr4 2573487 2577177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00431 1 624 Receptor kinase-like Gene Family AT5G16000 77.373 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva04g00431 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00431 - - gmx:100798412 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01916 03 17282719 17286565 Bva04g00431 04 2573487 2577177 BWGD
Bva04g00431 04 2573487 2577177 Bva04g00431 04 2573487 2577177 ECH