Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00422 ATGCAGGCAAGAGAGGTTGCAGCACTCAACTATCTACTCCCTTCAAACCCATCTCCATACCCATCTCATTACAGTCTCATCCAAAACAGCCTACCCACATTCCAATTCCAAGGATTCTCCAATAATCAAATCTATGGCTTCCAAAACCCTTCTCAAATCCAAGACTTCAGCCCTCAATCTTCTTGTATCAGCAGCAATTCAACTTCTGATGAGGCTGATGAGCAGCAACATAGTCTCATCCATGAGAGAAAACACAGAAGGATGATATCAAACCGAGAATCGGCACGCCGGTCACGGATGAGAAAGCAGAAGCACCTTGATGAGCTGTGGTCGCAGGTGGTGTGGCTGAGGAATGAGAATCACCAGCTGATTGATAAGTTGAATCATGTGTCAGAGTGCCATGACAAAGTACTTCAAGAAAATGCTCAGCTCAAAGAGCAAGCTTCAAATCTTCGAGAAATGTTGAGTGACATGCAGCTACACAGTCCTTGCCCTCCTCCCTTGAGCCCTTTGGAAGACATCCCTTGCAGCTCAACCATCTCAAGTTCCTTTGACCTGCTTGGCTG 566 0.4629 MQAREVAALNYLLPSNPSPYPSHYSLIQNSLPTFQFQGFSNNQIYGFQNPSQIQDFSPQSSCISSNSTSDEADEQQHSLIHERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSECHDKVLQENAQLKEQASNLREMLSDMQLHSPCPPPLSPLEDIPCSSTISSSFDLLG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00422 188 MobiDBLite consensus disorder prediction 56 73 - -
Bva04g00422 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 182 IPR044521 -
Bva04g00422 188 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Bva04g00422 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Bva04g00422 188 Gene3D - 81 137 - -
Bva04g00422 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Bva04g00422 188 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Bva04g00422 188 Coils Coil 134 161 - -
Bva04g00422 188 MobiDBLite consensus disorder prediction 56 79 - -
Bva04g00422 188 SUPERFAMILY Leucine zipper domain 83 132 IPR046347 GO:0003700|GO:0006355
Bva04g00422 188 PANTHER BZIP TRANSCRIPTION FACTOR 1 182 - -
Bva04g00422 188 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00422 Bva-Chr4 2521936 2522502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00422 18 163 bZIP Transcription Factor Family AT3G30530 63.087 6.78e-55 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva04g00422 bZIP_1 1.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00422 - - aprc:113863596 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01925 03 17343255 17343818 Bva04g00422 04 2521936 2522502 BWGD
Bva04g00422 04 2521936 2522502 Bva04g00422 04 2521936 2522502 ECH