Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00420 ATGACGATTGGAAGCCTTGCACCTAAGACAGAGAAGAAGAGATCACGAAAAAACAAGTCAGTTGTTAATGAGAATGCCCCCTTGTTGCCTAAAAATCATGAGGAAGAACTTGGgtttgatgattttaatgGAGCTTCATTTTCCGGAGCTGTTTTTAACTTATCTACCACCATCATTGGTGCTGGGATCATGGCTTTGCCAGCAACCTTGAGAGAGTTGGGGATGCTGCCTGGGTTAGCTATGATTATCTTCATGGCCTTCTTGACAGACAAATCAATTGAGTTCATGATGAGGTTTACCCGCGCCGGGAAGTTCCTGTCTTATGGAAGTCTCATGGGGGGATCCTTTGGCAAATATGGAAAAGCTTTTCTGCAGATATGTGTTATGGTCAACAACATTGGTGTGCTCATTGTTTACATGATCATAATTGGTGATGTGCTTTCTGGAACTTCATCAACCGAAGCTCACCATTCAGGTATCCTTGAAGGGTGGTTTGGTGTGCACTGGTGGACTGGCCGTACATTTGTTCTTCTGTTTACAACACTTGCTATATTTGCACCTCTGGCAAGCTTTAAGCGAATCGATTCATTGAGATTCACATCTGCCCTATCAGTTGCATTGGCTGTTGTTTTTCTTGTCATTGCTGTGGGTATTGCAATTATCAAGCTAATAAGTGGAGGCATTGAGATGCCCAGGCTCCTGCCTGTTGTTACTGGTTTCTCATCATTCTTCAAACTGTTCACTGTAGTCCCTGTGCTTGTCACTGCCTACATCTGCCATTACAATGTTCACAGCATCGATAATGAACTTGAAGACGCCTCACAGATGCAAGGGGTTGTAAGAACTGCTCTTGCTCTATGCTCTTCTGTGTATATAATGATAAGCTTCTTCGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAACTTCGATACCGATCTTGGGATTCCATTTGGTGCTGTGCTCAATGATGCTGTTCGTCTTAGCTATGCTGCACATCTCATGCTTGTATTTCCAGTTGTCTTCTATCCACTGCGGCTCAACATAGATGGTCTCCTGTTTTCCAAGTCAAGGCCTTTGGTTCTTGATAACTTCAGATTTGCATCAATTACTGTTATCCTCATCAGTCTTATCTTCGTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACAGCTGCAGTATGTTTAGGATTCATATTTCCTGCCGCCATTACTCTCAGGGATCGATTCAATCTTGCAACTAGATCAGACAAGATTCTAGCCGTCATTATGATTGTCCTGGCAGTGTTCTCAAACCTGGTGGCTATATACAGTGATGCCTATTCCTTGATAAAGAGGAATAAAAGTTCTCTCCAGTG 1391 0.4299 MTIGSLAPKTEKKRSRKNKSVVNENAPLLPKNHEEELGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMLPGLAMIIFMAFLTDKSIEFMMRFTRAGKFLSYGSLMGGSFGKYGKAFLQICVMVNNIGVLIVYMIIIGDVLSGTSSTEAHHSGILEGWFGVHWWTGRTFVLLFTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAIIKLISGGIEMPRLLPVVTGFSSFFKLFTVVPVLVTAYICHYNVHSIDNELEDASQMQGVVRTALALCSSVYIMISFFGFLLFGEGTLDDVLANFDTDLGIPFGAVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLLFSKSRPLVLDNFRFASITVILISLIFVGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLRDRFNLATRSDKILAVIMIVLAVFSNLVAIYSDAYSLIKRNKSSLQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00420 463 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g00420 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
Bva04g00420 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
Bva04g00420 463 PANTHER AMINO ACID TRANSPORTER 7 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00420 Bva-Chr4 2497999 2502337 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00420 3 458 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.956 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00420 K14207 - gmx:100796345 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00420 04 2497999 2502337 Bva04g00420 04 2497999 2502337 ECH