Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00405 ATGGCATCGAACAACATGGATCAACCCCTCTGTGCCAATGGCTGTGGCTTCTATGGCACCGCCGCGAACCAGAACCTCTGCTCGAAGTGCTACGCAGATCTTCTCAAAGAAAAGATCATCAAATCGGTTCAATCCCCGAGCTTGAACAATGAAGACTCGCTCAACTCCTGTGTTTCCATTATTGAATCTTCTGCTGCCAAGCCATCGTTGCCGACCAATGCATGTGACGTTTCTGATGTTGCTGTTGCTGCCTCTGATtctgaagagaagaagaagaaacttagGTGCAATAACTGCAACAAGAGGATTGGGCTGGCAGGGTTCGAGTGTCGGTGTGGGGACGTCTTTTGCGGAAAGCATAGGTACCCAGAAGAGCATGCATGCAAAGTCAACTTCAAGGAGAGTGGTCGCCAGATTTTGGCTAAACTCAATCCTATCTGCAAGGCTGATAAGTTGGAGTCTAGGGTTTA 470 0.4638 MASNNMDQPLCANGCGFYGTAANQNLCSKCYADLLKEKIIKSVQSPSLNNEDSLNSCVSIIESSAAKPSLPTNACDVSDVAVAASDSEEKKKKLRCNNCNKRIGLAGFECRCGDVFCGKHRYPEEHACKVNFKESGRQILAKLNPICKADKLESRV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00405 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 10 50 - -
Bva04g00405 156 Pfam A20-like zinc finger 10 31 IPR002653 GO:0003677|GO:0008270
Bva04g00405 156 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
Bva04g00405 156 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Bva04g00405 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 7 156 - -
Bva04g00405 156 Pfam AN1-like Zinc finger 96 129 IPR000058 GO:0008270
Bva04g00405 156 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 7 156 - -
Bva04g00405 156 SUPERFAMILY AN1-like Zinc finger 84 150 IPR035896 -
Bva04g00405 156 SMART A20_3 8 32 IPR002653 GO:0003677|GO:0008270
Bva04g00405 156 Gene3D - 71 151 IPR035896 -
Bva04g00405 156 ProSiteProfiles Zinc finger A20-type profile. 5 39 IPR002653 GO:0003677|GO:0008270
Bva04g00405 156 Gene3D - 2 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00405 Bva-Chr4 2389858 2390328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00405 10 153 C2H2 Transcription Factor Family AT3G52800 36.306 1.16e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00405 - - adu:110276973 154.066