Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00398 ATGCTTCTAAGATTGAGGACATTGCATCCAGAACTCCTTCGTGGAAGACTCAGCGAGAATGTGCTTGCTGGTGGTGATCATGAGCAACATGAAGAGGTTCAACAATGGGTGTCGAAAACTACCATGTCATCGAGCTTGTCGGGGAAGGTGTACATGGGCAGGCGAAAGTGTACAGGACAGACTGTTGCAATGAAATTCATAATGAAACATGGGAAAAGTGAGAAAGATGTTCATAATTTACGACAAGAAATCGAGATATTAAGAAGGCTGAAGcatgataatattattcaaatgcTTGATTCCTTTGAAAGCCCACAAGAGTTTTGTGTCGTCACAGAATTTGCACAAGGTGAACTATTTGAGATTCTTGAAGATGATCAGTGCCTTCCTGAAGAACAGGTTCAAGCAATAGCAAAGCAATTGGTGAGAGCCTTACATTACTTGCATTCCAACCGCATTATCCATCGTGACATGAAGCCACAGAATATTCCCATTGGCACTGGATCTGTTGTTAAGCTTTGTGATTTTGGGTTTGCACGGGCAATGTCCACAAATACTGTTGCTTTGCAATCCATAAAAGgCACTCCATTGTACATGGCTCCAGAACTTGCACTTGCACGTTGGTGTTATTCTGATCCTGTTAAATATCCGAAAAACATGACTGCACATTTCAAAAGCTTTCTAAAGGGTTTGCTTAGCAAGacACCAGAAAGTCGACTGACTTGGCCCGCTCTCCTTGAGCACCCATTTGTCAAAGAAACAGTAGACGTGTTGGAATCCGGGGAAATGCGCGAGATAGCTGGTTCACCGGGAGGCTTGGAGGCAGCATGGAGGGGTGAGAGGAAAAACATTCAAACTAAAACACCTCAAGTTGCTTCTAGTCCTGCATGTACGTATTCCATCAAAATTCTCATATTCATACATTATGATTTCAGTTATCTTTTCATGATGATTTACGTTGTCAAAGGAAAAGGCAACTATACCGCTGCTGCTGAGGAGAGTATTGCATCACCCCTTCAAAGTGAAGCTCAGTTAAATGGTCCTAAGGCACATAACGAGTCCCCAATCCGGAATTGTGTGGAAGAGCCAGGCCGCCAGAGGTTGGACAGACTAGAAAATAACTCCCGCACAGTGAAAGGTGCAAAAATAATTGGTCGAGATAATGAAGCATTGACGCATATTCTGCTACCATTAAAAAGATGGTCTAAAAGatctcaaaatttttccagACGTAAGCTATTCAATggATTCTATGAGTACATTAAAGGTGCTTCTATCATGGAGTTTTTAAAGGATTTTCTTTCACATGAGGATCCCAATATACGTGCCAAAGCTTGCAGTACTATGGGGAACATGTGTCGTTATAATGACTACTTTTATAGCTCACTTGCAAGACATCAAATAATTAGCATACTTATTGATCGGTGTACTGATCCAGATAAAGAAACCCGGAAATATGCTTGCTTTGCTATTGGAAATGCAGCCTTCCACAAAGACATGCTATATGATGAGCTAAGAAGGTCTATACCTCGATTATCAAATTTGCTGCTGAATCCTGAGGAGGAAGAGAGGACTAAAGAAAAATGCTGCAGTATTGGCACTGGACTCAAGCAGAAAGGATTTAGAAAAGATGTGTCAGCACGCACCTTGCAGAGAGTTCCTGCGTTAATCAGAGTTGTTTCCTGTGATTGGACGCCTTCAGCAGTCCCCAGAATCATCAATATCTCATCGTGCGTCTGTAATTGTGAGCAAAGTTGCTG 1760 0.4114 MLLRLRTLHPELLRGRLSENVLAGGDHEQHEEVQQWVSKTTMSSSLSGKVYMGRRKCTGQTVAMKFIMKHGKSEKDVHNLRQEIEILRRLKHDNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDQCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNIPIGTGSVVKLCDFGFARAMSTNTVALQSIKGTPLYMAPELALARWCYSDPVKYPKNMTAHFKSFLKGLLSKTPESRLTWPALLEHPFVKETVDVLESGEMREIAGSPGGLEAAWRGERKNIQTKTPQVASSPACTYSIKILIFIHYDFSYLFMMIYVVKGKGNYTAAAEESIASPLQSEAQLNGPKAHNESPIRNCVEEPGRQRLDRLENNSRTVKGAKIIGRDNEALTHILLPLKRWSKRSQNFSRRKLFNGFYEYIKGASIMEFLKDFLSHEDPNIRAKACSTMGNMCRYNDYFYSSLARHQIISILIDRCTDPDKETRKYACFAIGNAAFHKDMLYDELRRSIPRLSNLLLNPEEEERTKEKCCSIGTGLKQKGFRKDVSARTLQRVPALIRVVSCDWTPSAVPRIINISSCVCNCEQSC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00398 586 Gene3D - 402 573 IPR011989 -
Bva04g00398 586 PANTHER PROTEIN KINASE RELATED 48 204 IPR045193 GO:0004674
Bva04g00398 586 PANTHER PROTEIN KINASE RELATED 204 404 IPR045193 GO:0004674
Bva04g00398 586 PANTHER PROTEIN KINASE RELATED 416 534 IPR045193 GO:0004674
Bva04g00398 586 SUPERFAMILY Protein kinase-like (PK-like) 47 257 IPR011009 -
Bva04g00398 586 SMART serkin_6 36 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00398 586 SUPERFAMILY ARM repeat 415 531 IPR016024 -
Bva04g00398 586 Pfam Protein kinase domain 47 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00398 586 ProSiteProfiles Protein kinase domain profile. 36 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00398 586 Gene3D Transferase(Phosphotransferase) domain 1 27 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00398 Bva-Chr4 2364832 2373028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00398 22 257 MAP Kinase Kinase Kinase AT1G53570 26.978 2.63e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Bva04g00398 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00398 K06228 - gmx:100813995 452.981