Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00393 ATGAATGAAGGGATTCACACTACAGTTGAAGATAACCAACCCAGCATCTCATTTAGGATCTTTGAGGGTGAAAGAACTAGGGCCAGTAATAACAACTTGTTGGGAGCAGTTGAGCTTTCGAGCATTCGTCTCGCTCCCCGGGGCGAGCCTAGCATCAAAGTTTGTTTTGATCTAGACGTTAATGGCATCTTGAATGTCTCTGCTGAGGAAATAATCACCGGGAAGAGAAACCAGATCACCATAACCAATGACAAGGGAAGGTTGTCAAGGGCCGAAATTGAGAGAATGATTGAAGAAGCTGAGAAATTCAAGGTTGAAGATGACAAGTTCAAGGAAGTGGTTGAAGCAAAGAATGCTTTGGAGAACTTTGCCTACAACATGAGAAGTGCTATAAATAATGAAGTGATTGGTTCAACGCTTTCCTCAGAAGACAAGAAGAAGATAGAGGGTGCAATTAAGAAGGCTGTTCAATGGCTTGAAAGCAACCAGCTTGCAGAAGCAGATGAGATTAAGTATACAATGGAGGAGCTTGAGAGCGTGTGTACACCTATTATAGTCAGGGCATTCCAAGGTGGGGAAGGGGATAATGTTGCATCTTCAGCTTCTGATGGTGGTCGTAGTTCTCGCTTCACAAATATTTCTGGAAGAAACATTATGAAATTTGCCTTGTCAGCAATCATATCAGGATTTGTAGGTGATATTCAGGTTTATGCTTATTTACcccaaaatgataaaatcttaCGTGCTCAATACGAGCTCTCAGTTTTtGCAATCAAGGCTGAACACGAGGAACACAAGAGGAAGATTGAAGCACTGAACTCTTTGAAAAACTATGCCTGCAACATGAGAATTTCTATAAACACTACTGAGAATATCAGTTCAAAGCTTTCTCCAGAAGACAAGAACAAGATTGAGAAGACCTTAGAATGGGTAGATTCCAACAAGTTCGCCGAAGAAGAAGAGATAACAGATAAAATCAAGGAGCTTGGGAGCATCTGTAAACCCGTTTCCGTCAACATATTTGGTCAAGATGATGGTAGCATGAATGATGATAGACCTCCGGGTAAGAGTTCCTCCTCTTTCAAGAAAGAAGTGGCAAAGAACGTAGCATCATCTCTTGTCTTGGCAACCTTAGCTGCAGCTTCAGGTGATGCTAGTGGGCTAGCTGATTTGGTTGATGTCATAGAAATTGGAAAACCTTCTGGTTCGAGTACCCTCTCTTATAAGAAACAAGTGTCAAAGAAGTTCAGAAGATATATTGTTTCGACAACCATATCAGCTGCCATTGGTGATGTTACTGGGCTATCTGGTCAATTATTTGTTGATGCTCTAGTTTCAGCATGTGTAGAAAGATTCCTGAAGTTGCGTGGATCGGGCAAGGCACAAGATATGGCACAGCGACATGACCCCACAGGAACTCCgcagcacaaaaaaaaata 1439 0.4114 MNEGIHTTVEDNQPSISFRIFEGERTRASNNNLLGAVELSSIRLAPRGEPSIKVCFDLDVNGILNVSAEEIITGKRNQITITNDKGRLSRAEIERMIEEAEKFKVEDDKFKEVVEAKNALENFAYNMRSAINNEVIGSTLSSEDKKKIEGAIKKAVQWLESNQLAEADEIKYTMEELESVCTPIIVRAFQGGEGDNVASSASDGGRSSRFTNISGRNIMKFALSAIISGFVGDIQVYAYLPQNDKILRAQYELSVFAIKAEHEEHKRKIEALNSLKNYACNMRISINTTENISSKLSPEDKNKIEKTLEWVDSNKFAEEEEITDKIKELGSICKPVSVNIFGQDDGSMNDDRPPGKSSSSFKKEVAKNVASSLVLATLAAASGDASGLADLVDVIEIGKPSGSSTLSYKKQVSKKFRRYIVSTTISAAIGDVTGLSGQLFVDALVSACVERFLKLRGSGKAQDMAQRHDPTGTPQHKKK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00393 479 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 270 343 IPR029048 -
Bva04g00393 479 Pfam Hsp70 protein 5 187 IPR013126 GO:0005524|GO:0140662
Bva04g00393 479 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 3 201 - -
Bva04g00393 479 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 258 348 - -
Bva04g00393 479 MobiDBLite consensus disorder prediction 460 479 - -
Bva04g00393 479 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 2 116 IPR029047 -
Bva04g00393 479 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 6 121 IPR029047 -
Bva04g00393 479 Gene3D - 252 342 IPR029048 -
Bva04g00393 479 Gene3D - 117 190 IPR029048 -
Bva04g00393 479 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 115 195 IPR029048 -
Bva04g00393 479 PANTHER HEAT SHOCK PROTEIN 70KDA 3 201 IPR013126 GO:0005524|GO:0140662
Bva04g00393 479 PANTHER HEAT SHOCK PROTEIN 70KDA 258 348 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00393 Bva-Chr4 2321685 2324338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00393 259 351 Calmodulin-binding Proteins AT3G12580 47.573 9.58e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00393 K03283 - jre:109006783 233.417