Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00392 ATGGTAAATTACTTCGTACGAGAATTCAAAAGGAGGAACAAGAAGGACATAAGCAGAAACTCAAGAGCATTAAGGAAGTTGAGGACTGCTTGTGAGGAGGCAAAAAGGACACTCTCATCAACAACTGAGACCACCATTGAAATAGATTCTTTATACGAAGTTGATGACTTCTTTGCAACAATCACACGTGCCAAGTTTGAGAAACTAAACGTGGAGCTTTTCAGGAAGTGTATGGGGCCTGTGGAAAGGTGTCTCAAAGATGCCAAGATGAACAAAAGTAGTGTCCATGATGTTGTCCTCATTGGTGGATCAACAAGGATCCCAAAAGTACAGCAGCTATTGCAGGATTTCTTTGGTGGGAAGAAACTTTGCAAAAGCATCAATCCTGATGAAGCTGTGGCTTATGGTGCTGCTGTCCAAGCTGCAATACTAAATGGTCAAGGCAATGAAATGATTGAAAACTG 464 0.4159 MVNYFVREFKRRNKKDISRNSRALRKLRTACEEAKRTLSSTTETTIEIDSLYEVDDFFATITRAKFEKLNVELFRKCMGPVERCLKDAKMNKSSVHDVVLIGGSTRIPKVQQLLQDFFGGKKLCKSINPDEAVAYGAAVQAAILNGQGNEMIEN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00392 154 PRINTS 70kDa heat shock protein signature 95 111 - -
Bva04g00392 154 PRINTS 70kDa heat shock protein signature 127 147 - -
Bva04g00392 154 Pfam Hsp70 protein 1 147 IPR013126 GO:0005524|GO:0140662
Bva04g00392 154 SUPERFAMILY Actin-like ATPase domain 1 145 IPR043129 -
Bva04g00392 154 Coils Coil 24 44 - -
Bva04g00392 154 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 153 - -
Bva04g00392 154 Gene3D Actin; Chain A, domain 4 1 76 - -
Bva04g00392 154 PANTHER HEAT SHOCK PROTEIN 70KDA 1 153 IPR013126 GO:0005524|GO:0140662
Bva04g00392 154 Gene3D - 77 124 - -
Bva04g00392 154 ProSitePatterns Heat shock hsp70 proteins family signature 3. 98 112 IPR018181 -
Bva04g00392 154 Gene3D - 125 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00392 Bva-Chr4 2321127 2321591 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00392 1 154 Calmodulin-binding Proteins AT3G12580 79.221 1.02e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00392 K03283 - tcc:18586110 244.588