Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00388 ATGATTTGGAAGAGAATGGCGAGAGGAACTGAGGGACTGGCAATTGGAATAGATCTTGGCACAACATATTCATGCGTTGGAGTATGGCAAGGAGATGGAGTTGAGATCATCATTAATGAAGAAGGCAAAAAGACGACACCGTCTTATGTTTCCTTCACAAACACACAACGGTTGATTGGCAATGCTGCGAAGAACCAGGCTGCCACAAACCCAGCCAACACTATATTTGATGCAAAGAGGTTAATAGGTAGGAGATTTAGTGACTCTATTGTTCAGAATGACATAAGGTTATGGCCATTTAAAGTAATTGCTGGTGATGACGACAAACCCAAGATAGTTGTTACACACaagtataaagaaaaatacttttatccTGAGGAAATCTCATCTATGGTTCTCACAAAGATGCGTGATATAGCAGAGAAATACTTAGGATCAAAGATAAAGAATGCAGTTGTTACGGTACCTGCTTATTTCACTGACTCTCAACGCCAAGCTACCAAAGATGCTGGCGCTATTGCTGGCCTCAATATTTTGCGGATAATCAATGAGCCTACTGCTGCTGCTATTGCATATGGCCTTGAAAAAAAGGTTAATAGCAGTACCAGTGCAAGAAATGTTTTCGTCTTTGATCTTGGTGGCGGCACCTTTGATGTGTCTCTTCTTACAATAAATGGTGATAGATTTGAAGTTAAAGCTACGAATGGTGACACCCATCTTGGGGGAGAGGACTTCGATAGCACAATGGTAAATTACTTTGTACGAGAATTCAAAAGGAGGAACAAGAAGGACATAAGCAGAAACTCAAGAGCATTAAGGAAGTTGAGGACTGCTTGTGAGAAGGCAAAAAGGACACTCTCATCAACAACTGAGACCACCATTGAAATAGATTCTTTATACGAAGGTGATGACTTCTTTGCAACAATCACACGTGCCAAGTTTGAGGAACTAAACGTGGGGCTTTTCAGGAAGTGTATGGGGCCTGTGGAGAGGTGTCTCAAAGATGCCAATATGAACAAAAGCAGTGTCCATGATGTTGTCCTCATTGGTGGATCAACAAGGATCCCAAAAGTACAGCAGCTATTGCAGGATTTCTTTGGTGGGAAGAAACTTTGCAAAAGCATCAATCCTGATGAAGCTGTGGCTTATGGTGCTGCTGTCCAAGCTGCAATACTAAATGGCCAAGGCAATGAAAAGATTGAAAACTGGACTCTCATTGATGTTACTCCTTTGTCCCTTGGAGTAGGGATGAGAGGAGATATCATGAGAGTTTACATCCCTAGAAACACTCCAATTCCTACAATGAATGAAGGGACGCACACTACAGTTGAAGATAACCAACCCAGCATCTCATTTAGGATCTTTGAGGGTGAAAGAACCAGGGCCAGTGATAACAACTTGTTGGGAGCAGTTGAGCTTTCGAGCATTCGTCTCGCTCCCCGGGGCGAGCCTAGCATCAAAGTTTGTTTTGATCTAGACGCTAATGGCATCTTGAATGTCTCTGCTGAGGAAATAATCACCGGGAAGAGAAACCAGATCACCATAACCAATGACAAGGGAAGGTTGTCAAGGGCAGACATTGAGAGAATGATTGAAGAAGCTGAGAAATTCAAGGTTGAAGAtgagaggttcaaggaagtgGTTGAAGCAAAGAATGCTTTGGAGAACTTTGCCTACAACATGAGAAGTGCTATAAATAATGAAGTGATTGGTTCAAGGCTTTCCTCAGAAGACAAGAAGAAGATAGAGGGTGAAATTAAGAAGGCTGTTCAATGGCTTGAAAGCAACCAGCTTGCAGAAGTAGATGAGATTAAGTATACAATGGAGGAGCTTGAGAGCGTGTGTACACCTATTATAGTCAGGGCATTCCAAGGTGGAGAAGAGGATAATGTTGCATCTTCAGCTTCTGATGGTGGTCGAAGTTCTCGCTTCACTAATATTTCTGGAAAAAACATTATGAAATTTGTCTTGTCAGCAATCATATCAGGATTTGTAGGTGATATTTCGGGGTTGGTTTCTTCTTTGGGTGATTG 2033 0.4127 MIWKRMARGTEGLAIGIDLGTTYSCVGVWQGDGVEIIINEEGKKTTPSYVSFTNTQRLIGNAAKNQAATNPANTIFDAKRLIGRRFSDSIVQNDIRLWPFKVIAGDDDKPKIVVTHKYKEKYFYPEEISSMVLTKMRDIAEKYLGSKIKNAVVTVPAYFTDSQRQATKDAGAIAGLNILRIINEPTAAAIAYGLEKKVNSSTSARNVFVFDLGGGTFDVSLLTINGDRFEVKATNGDTHLGGEDFDSTMVNYFVREFKRRNKKDISRNSRALRKLRTACEKAKRTLSSTTETTIEIDSLYEGDDFFATITRAKFEELNVGLFRKCMGPVERCLKDANMNKSSVHDVVLIGGSTRIPKVQQLLQDFFGGKKLCKSINPDEAVAYGAAVQAAILNGQGNEKIENWTLIDVTPLSLGVGMRGDIMRVYIPRNTPIPTMNEGTHTTVEDNQPSISFRIFEGERTRASDNNLLGAVELSSIRLAPRGEPSIKVCFDLDANGILNVSAEEIITGKRNQITITNDKGRLSRADIERMIEEAEKFKVEDERFKEVVEAKNALENFAYNMRSAINNEVIGSRLSSEDKKKIEGEIKKAVQWLESNQLAEVDEIKYTMEELESVCTPIIVRAFQGGEEDNVASSASDGGRSSRFTNISGKNIMKFVLSAIISGFVGDISGLVSSLGD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00388 677 Pfam Hsp70 protein 14 621 IPR013126 GO:0005524|GO:0140662
Bva04g00388 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 17 24 IPR018181 -
Bva04g00388 677 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 549 627 IPR029048 -
Bva04g00388 677 Gene3D - 76 131 - -
Bva04g00388 677 Gene3D - 197 372 - -
Bva04g00388 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 398 555 IPR029047 -
Bva04g00388 677 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 6 634 - -
Bva04g00388 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 209 222 IPR018181 -
Bva04g00388 677 PANTHER HEAT SHOCK PROTEIN 70KDA 6 634 IPR013126 GO:0005524|GO:0140662
Bva04g00388 677 Coils Coil 272 292 - -
Bva04g00388 677 Gene3D Actin; Chain A, domain 4 241 324 - -
Bva04g00388 677 Gene3D - 15 390 - -
Bva04g00388 677 Gene3D - 551 624 IPR029048 -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 402 421 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 375 395 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 63 71 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 13 26 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 41 53 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 483 499 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 215 225 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 343 359 - -
Bva04g00388 677 PRINTS 70kDa heat shock protein signature 151 171 - -
Bva04g00388 677 SUPERFAMILY Actin-like ATPase domain 13 196 IPR043129 -
Bva04g00388 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 346 360 IPR018181 -
Bva04g00388 677 SUPERFAMILY Actin-like ATPase domain 204 393 IPR043129 -
Bva04g00388 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 397 550 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00388 Bva-Chr4 2300746 2303228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00388 6 629 Calmodulin-binding Proteins AT3G12580 70.032 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00388 K03283 - jre:109006783 877.856