Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00387 ATGGACCAAAGTGGTAGTGAAGGATCAGCAATCGGAATAGATCTTGGCACAACATACTCGTGCGTTGGAGTATGGCAGCATAATCAAGTTGAGATCATTTTCAATGACCAAGGGAATAGCACGACCCCATCTTATGTTGCCTTCACAAATACACAACAGTTGACTGGCGAAGCTGCTAAAAACCAGGCTGCAAGGAACCCAACTAATACCATATTTGATGCGAAGAGATTGATTGGTAGGAGATTCAATGACCCCTTTGTTCAGAATGATATAAAGTTGTGGCCATTCAAGGTCATTGCGGGTGACGATGACAAACCTaagattgttattgattataaGTATGAGGAAAAGCAATTTTCTGCTGAGGAAATTTCATCTCTGGTTCTAACAAAAATGCGTAGGATTGCAGAGGATTATTTAGGATCAACTGTGAAAAATGCAGTCATCACAGTACCTGCTTACTTCAACGACTCTCAACGCCAAGCTACCAAAGATGCTGGTGTAATTGCTGGCCTCAATGTTATGCGAATAATCAATGAGCCAACTGCAGCAGCAATTGCATATGGTCTCCACAGGAGATCTAAAACTGATCGTGAAAGAAATGTTTTCATCTTCGATCTAGGCGGTGGTACGTTTGATGTGTCACTCCTCACAATTAAAGAGGATGTCTTTGAAGTTAAGGCCACTGCAGGAGACACTCACCTTGGAGGTGAGGACTTTGATGACAGAATGGTGAACCATTTTGTGCGAGAATTCAAGAGAAAGAACAATAATGACATAAGCGAAAGCCCAAGAGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAGAGGATACTCTCATCAACTGCTGAAACCACAATCGAGGTAGATTCCTTGTATGAAGATATTGACTTCTCTTCAACAATAACTCGTGCTAGGTTTGAGGACCTCAACATGGACCTCTTTAGGAAGTGTTTAGAGACAATGAAGACTTGTCTTAGCGATGCTAAGATAGACAAAAACAATGTCCATGATGTTGTCCTCGTTGGCGGTTCTACTAGGATTCCCAAAGTGCAGGAACTCTTGCGAGATTTCTTCAATGGCCAGGAACTCTGCAAGAGCATTAACCCAGATGAAGCTGTTGCTCGTGGTGCTGCTGTCCAAGCAGCTATATTGAGTGGTCAAAGGAGTGAGAAGATTCAAAACTTGTTGCTGTTAGATGTTACACCTCTTTCCCTTGGTGTGGGGACTAAAGGGGATATTTTCAAAGTATTAATTCCAAGGAATACTCCCATTCCTGCAACAATGGAAGATGGATTCACTACAATTGAGGATAACCAAACCTCCATTTCCTTTGGGGTTTATGAGGGTGAAAGAACAAGAACTGTAGATAACAACCTGCTTGGTAATTTTAGGCTATCTGGCATTCCAAGAGCTCCAAAGGGTGTTCCTCAGATCACAATTTGCTTTGATATTGACGAAAATGGTATCTTAAGTGTCTCTGCTGAGGAAAAAGCCACTGGAAAGAGGAACAAGATTACTATAACTAATGATAAAGGAAGACTAACtaaggaagaaattgagagGATAATCGAAGAAGCTGAGAAATTCAAGGCTGAAGATGATGCCTACAAGAAGAAGATTGAAGCAAAGAATGAACTGGAGCACTACGTCTTTAACATGAGGAATGCTATAGAGCATGAGAATTTCAGTTCAAAACTTTCCCTAGCAGACAAGAAGATCATAGAGGATATAACTGAGCAGACCTTGCAGTGGCTTGAAGACAACCAGCTTGCAAGTGCAGATGAAATCAAGTTTACTATGGAGGAGTTTGAAGGCATTTGTGTTCCCATTCTTGTCAAAGCTTTTCAAGATATAGTTGATGTGGGCGCTCGTGGTGCTAGCTCCTCTTCTTTCGAGGGGATTTTGAACAATGTTCTTTCGATGTCTTCTTTCTCTGGTTTGAACTTAGAGTG 1961 0.411 MDQSGSEGSAIGIDLGTTYSCVGVWQHNQVEIIFNDQGNSTTPSYVAFTNTQQLTGEAAKNQAARNPTNTIFDAKRLIGRRFNDPFVQNDIKLWPFKVIAGDDDKPKIVIDYKYEEKQFSAEEISSLVLTKMRRIAEDYLGSTVKNAVITVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLHRRSKTDRERNVFIFDLGGGTFDVSLLTIKEDVFEVKATAGDTHLGGEDFDDRMVNHFVREFKRKNNNDISESPRALRRLRTACERAKRILSSTAETTIEVDSLYEDIDFSSTITRARFEDLNMDLFRKCLETMKTCLSDAKIDKNNVHDVVLVGGSTRIPKVQELLRDFFNGQELCKSINPDEAVARGAAVQAAILSGQRSEKIQNLLLLDVTPLSLGVGTKGDIFKVLIPRNTPIPATMEDGFTTIEDNQTSISFGVYEGERTRTVDNNLLGNFRLSGIPRAPKGVPQITICFDIDENGILSVSAEEKATGKRNKITITNDKGRLTKEEIERIIEEAEKFKAEDDAYKKKIEAKNELEHYVFNMRNAIEHENFSSKLSLADKKIIEDITEQTLQWLEDNQLASADEIKFTMEEFEGICVPILVKAFQDIVDVGARGASSSSFEGILNNVLSMSSFSGLNLE 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00387 653 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 550 IPR029047 -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 478 494 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 338 354 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 37 49 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 9 22 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 59 67 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 397 416 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 210 220 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 370 390 - -
Bva04g00387 653 PRINTS 70kDa heat shock protein signature 147 167 - -
Bva04g00387 653 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 620 IPR029048 -
Bva04g00387 653 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Bva04g00387 653 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Bva04g00387 653 Gene3D - 517 620 IPR029048 -
Bva04g00387 653 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Bva04g00387 653 SUPERFAMILY Actin-like ATPase domain 197 389 IPR043129 -
Bva04g00387 653 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Bva04g00387 653 CDD HSPA1-2_6-8-like_NBD 10 388 - -
Bva04g00387 653 Gene3D - 193 367 - -
Bva04g00387 653 Coils Coil 522 542 - -
Bva04g00387 653 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 384 515 IPR029047 -
Bva04g00387 653 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 5 629 - -
Bva04g00387 653 Pfam Hsp70 protein 10 615 IPR013126 GO:0005524|GO:0140662
Bva04g00387 653 Gene3D - 72 127 - -
Bva04g00387 653 Gene3D Actin; Chain A, domain 4 236 319 - -
Bva04g00387 653 Gene3D - 11 383 - -
Bva04g00387 653 PANTHER HEAT SHOCK PROTEIN 70KDA 5 629 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00387 Bva-Chr4 2295980 2298066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00387 7 629 Calmodulin-binding Proteins AT3G12580 71.955 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00387 K03283 - bvg:104900138 902.894