Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00381 ATGAGGCTCGTTATATCAGCTCTCTGTCTTCTTGTGCTATTCTCTTATGCAGCTGCATATGATCCCTTAGATCCAAATGGGAACATAACAATCAAGTGGGACGTCATGTCTTGGACCGCAGATGGTTATGTGGCAGCTGTAACAATGAACAATTTCCAAATGTTTCGACACATCATGAATCCTGGATGGACCTTAGCATGGACATGGGCAAAGAAAGAAGTTATATGGTCCATGGTAGGGGCTCAAACCACTGAACAAGGTGACTGTTCCAAGTTCAAAGGCAATGTACCTCATTGCTGCAAGAAAACACCCACAGTTGTGGACTTGCTCCCTGGTGTACCTTACAATCAGCAATTCACAAACTGCTGTAAAGGTGGAGTTGTAGCAGCATGGGGCCAAGACCCTTCAGCTGCTGTCTCTGCCTTCCAAGTGAGTGTCGGCCAAGCAGGTACCTCAAACAAGACAGTTAAGCTCCCCAAGAATTTCACCCTCCTGGCTCCAGGACCTGGCTACACTTGTGGCCCTGCAAAGATTGTTCCTTCCACAACTTTTCTTACTTCTGACAAGCGTCGAAAGACACAAGCTCTAATGACATGGAATGTAACTTGCACTTACTCACAATTTCTAGCGAGTAAGAACCCCAAATGTTGTGTCTCTCTCTCGACCTTCTACAATGAAACCATTACTCCTTGCCCCTCTTGTGCTTGTGGCTGCCATAACAGGAAGAATTGTGTCAAGAGCGACTCTAAAATTCTCAGCACAGTGGGAGCTCACACACCAAGGAAGGACAATGAACCATTGCTACAATGCACACATCATATGTGCCCAATCAGGGTACACTGGCATGTGAAACTCAACTATAAGGACTATTGGAGAGTCAAGATTGCCGTTACAAATTTCAATTACAGGATGAATTACACTCTCTGGACTCTTGCGGTTCAGCATCCAAATCTCAACAATGTCACTCAAGTTTTCAGCTTTGGTTACAAGCCAGTGAATTCCTATGGACCCATAAaTGACACTGGCATGTTCTACGGCACGAAATACTATAATGATCTATTAATGGAAGCCGGGCCGACGGGGAATGTTCAGTCGGAGGTGCTTCTGAAAAAGGACAAGGATACCTTCACCTTCAAGCAAGGGTGGGCATTTCCTCGGAAGGTCTATTTCAATGGTGAAGAATGCATGATGCCACCGCCTGATTCATACCCGTTTCTACCAAACTCTGCCCGTGTAAATCTGCCCACTTTCCCAGCATTCATCTTCTCTTTGCTTTTCCTATTAGTTCTTTGGTG 1295 0.4541 MRLVISALCLLVLFSYAAAYDPLDPNGNITIKWDVMSWTADGYVAAVTMNNFQMFRHIMNPGWTLAWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSAAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTSDKRRKTQALMTWNVTCTYSQFLASKNPKCCVSLSTFYNETITPCPSCACGCHNRKNCVKSDSKILSTVGAHTPRKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFGYKPVNSYGPINDTGMFYGTKYYNDLLMEAGPTGNVQSEVLLKKDKDTFTFKQGWAFPRKVYFNGEECMMPPPDSYPFLPNSARVNLPTFPAFIFSLLFLLVLW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00381 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Bva04g00381 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Bva04g00381 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Bva04g00381 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00381 Bva-Chr4 2242415 2245395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00381 1 430 COBRA Gene Family AT3G29810 64.253 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00381 - - gmx:100783410 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00381 04 2242415 2245395 Bva03g01990 03 17904892 17907489 BWGD
Bva04g00381 04 2242415 2245395 Bva04g00381 04 2242415 2245395 ECH
Bva03g01990 03 17904892 17907489 Bva04g00381 04 2242415 2245395 ECH