Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00376 ATGGGAATCTTAGCACAATGCTTTGGTCGCTCTGCTTCTGCTGCAAAATCTTCATCCATAATAGAAGATCTATGCCCTCGTTTTTCTCTTGCCCAACTCCGGAAATTCACCAACAATTTTGACCCAGGTCGAGCAATTACTGGagaatttggaaaattataCAAGGGTTCTCTTGATGGGGGAAGTGATGATACAATTCTGATTCTGCCAGCGAACTCGAGctacaagaaagaaacagcGTTGCTCTGCCAGCTTCGACACCCCAATCTGGTGTCTTTCATTGGATTTTGCaatgacaagaaaaatgaaaccatGCTCGTATATGAATACTTGTCTAATAGAAGCCTCCATGATCACCTACATCGGAATTATGAGTATGGTAGCATGGAACCCCTCTTATGGAAGAAAAGGCTTGAAATTTGCGTAGGAATAGCTCGTGGATTACATTACCTTCACACCGGAGCCAAGCGACCTATCTTCCATTGTGACATAAACCCCAGAAACATtcttttggataaaaattgGGTACCCAAAATTGCAAATCTGTGGATTTCATTAAAAGGACCAAAATTTTCGTCCAAGCCCAAACCAATCATGGCGAATCATATCAGGGGTACGCAGAGATACATGGCCCCAGAGTATGCTAAGAATGGAATTGTTACAGATAAGGTTGACGTCTATTCATTTGGTGTTCTTCTTCTAGATGTGCTGTGTGCAAAGAAATCTGAAGATCAACATGTAGAAAATGGCAGTGGATTCTGGAAAGAGAAAGCTCTAGTTGAGAAAGTAAGTAATTTTGTTGAAGCAGGAAAAGCTGGTGAGATTATTGATCAATGTTTGGAGGGAAAGATTGCACCAGAGTGTTTGGAATTGTTCATTGATATTGCAGAAAGATGTATGCTTTTTGTGCCTGCCGAGCGGCCATTCATAGGTGAAGTGGAGGTGGAACTTGAGCGTGCTCTGGCATTACAGCAGGAAGCAGATGAAAGGGAGAATGGTTATTATAGGATATA 1013 0.3949 MGILAQCFGRSASAAKSSSIIEDLCPRFSLAQLRKFTNNFDPGRAITGEFGKLYKGSLDGGSDDTILILPANSSYKKETALLCQLRHPNLVSFIGFCNDKKNETMLVYEYLSNRSLHDHLHRNYEYGSMEPLLWKKRLEICVGIARGLHYLHTGAKRPIFHCDINPRNILLDKNWVPKIANLWISLKGPKFSSKPKPIMANHIRGTQRYMAPEYAKNGIVTDKVDVYSFGVLLLDVLCAKKSEDQHVENGSGFWKEKALVEKVSNFVEAGKAGEIIDQCLEGKIAPECLELFIDIAERCMLFVPAERPFIGEVEVELERALALQQEADERENGYYRI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00376 337 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 335 - -
Bva04g00376 337 Gene3D Phosphorylase Kinase; domain 1 6 110 - -
Bva04g00376 337 Pfam Protein tyrosine and serine/threonine kinase 48 311 IPR001245 GO:0004672|GO:0006468
Bva04g00376 337 ProSiteProfiles Protein kinase domain profile. 1 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00376 337 PANTHER OS07G0166700 PROTEIN 13 335 IPR045272 GO:0004714|GO:0006468
Bva04g00376 337 SUPERFAMILY Protein kinase-like (PK-like) 17 315 IPR011009 -
Bva04g00376 337 Gene3D Transferase(Phosphotransferase) domain 1 111 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00376 Bva-Chr4 2219571 2220917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00376 11 333 Receptor kinase-like Gene Family AT3G51550 37.952 5.73e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva04g00376 PK_Tyr_Ser-Thr 9.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00376 - - adu:107486597 286.189