Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00375 ATGGGAATACTTCCTAAATGCTTTGGTTTCTCCGATTCAGAGCATACAAGTTCATCTACTCACGCGAATCAATTCAAAACTCAAATAGAAGAACTATGCCATCGCTTTTCTCTATCTCAGCTCCGAAAATCAACCAACAACTTTGACAAAAGCCAACTAATCGGAAGAGGATACTTCAGTACTGTATACAAAGGCTGCCTCCATGCTGCAACTGGAACTACTGATCAAACAATTGCAATCAAGCGCATGGAAACTACTTCCTCCCAAAGAATACCCAACAAATCAGATCTGGATAAAGAGTTCAAGAACGAAATTGAGCTACTTTGCCAGATTCGTCATCCCAATGTGATCTCTCTCATAGGATTCTGCAATGAAAAGGATGAGAAAATCCTTGTCTATGAGTACATGCCAAATGGGTCACTCTTCGATCAGTTACGTCGTGAAGGTAAGTTCAGTAACATAGAACCTCTTTCATGGAAGAAAAGGCTTCAGATTTGCATAGGAGCAGCACGGGGCTTACACTACCTTCACACAGGAGTCAAGCGAACCATCTTCCATCGTGACATGAAAGCAAGCAACATTTTGTTGGACCAGAATTGGGTGCCTAAACTTGCAGATTTCAGTCTTTCCTTACGAGGGCCACATTCAATGCCAGCTGCTAAACCAACAACAGGGGTCCATTGTACGCTTGCAGGTACAGTTGGATTCATAGCACCAGAGTGCTACAGGGAAAGCATGTTCACAGATAGATCTGATGTCTACTCCTTTGGTATGGTTCTTTTACAAGTAGTATCTGGAAAGACGCTTGATGTTATTGTGGGTATGGTTGATAAGAGTAAACTGTATTCGAAGAGTTTAGCCTCGGAAGTCTTTGATATTGTAGAGAGAGGAAAGGGTAGTGAGATCATTGATCCATTTCTCAAGGGTCAAATTGCAAGAGAGTGTTGGAAAATGTTCATGGATATTGCAGATAGTTGTACGGTTCCTGATGCTGCTGATcagagaccaacgatgggcgAAGTGGAGCTGGAACTTGAACGTGCTCTGGAGTTGCAGGAGGAAGCAGATGCCAGTGCTTCTGGTGATTATATGATCTTCTA 1100 0.4164 MGILPKCFGFSDSEHTSSSTHANQFKTQIEELCHRFSLSQLRKSTNNFDKSQLIGRGYFSTVYKGCLHAATGTTDQTIAIKRMETTSSQRIPNKSDLDKEFKNEIELLCQIRHPNVISLIGFCNEKDEKILVYEYMPNGSLFDQLRREGKFSNIEPLSWKKRLQICIGAARGLHYLHTGVKRTIFHRDMKASNILLDQNWVPKLADFSLSLRGPHSMPAAKPTTGVHCTLAGTVGFIAPECYRESMFTDRSDVYSFGMVLLQVVSGKTLDVIVGMVDKSKLYSKSLASEVFDIVERGKGSEIIDPFLKGQIARECWKMFMDIADSCTVPDAADQRPTMGEVELELERALELQEEADASASGDYMIF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00375 366 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 365 - -
Bva04g00375 366 Gene3D Transferase(Phosphotransferase) domain 1 136 364 - -
Bva04g00375 366 SUPERFAMILY Protein kinase-like (PK-like) 25 343 IPR011009 -
Bva04g00375 366 SMART serkin_6 48 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00375 366 ProSiteProfiles Protein kinase domain profile. 48 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00375 366 ProSitePatterns Protein kinases ATP-binding region signature. 54 81 IPR017441 GO:0005524
Bva04g00375 366 Pfam Protein tyrosine and serine/threonine kinase 51 340 IPR001245 GO:0004672|GO:0006468
Bva04g00375 366 PANTHER OS07G0166700 PROTEIN 25 365 IPR045272 GO:0004714|GO:0006468
Bva04g00375 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Bva04g00375 366 Gene3D Phosphorylase Kinase; domain 1 9 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00375 Bva-Chr4 2217184 2218687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00375 15 355 Receptor kinase-like Gene Family AT5G39000 42.241 3.61e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva04g00375 PK_Tyr_Ser-Thr 9.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00375 - - gmx:100779112 310.457