Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00364 ATGCAGGCAATGAATGTTGGATATTTTAAAGTGCTTTCACTGGCAAAGCCTGAAGCTGGGAAGTTAACAATTGGCATAATTTCACTATTGCTAACATCCATGTCAAATATACTAATACCGAAATATAGAGGAGAAATAATAGACATTGTATCAAGAGATATGAGGTCTCTTTCAACTGCTCTCCGAGAATGGTTATTTACTTCAGCTAGTGAGAGGGTCGCAGCTCGCTTGAGGAAAGAGCTATTCATCCACCTAATTCATCAGGATATAGCCTTCTTTGATGTTACAGGAACCGGAGAACTGCAGAGCAGGCTATCTGAAGACAcacaaatcattaaaaatgcTGCAAGTACCAATCTCTGTGACATTCTTGGAAATCTCAGCACTGCTTCTATTGGTGTTGGTTTCATGTTTTCATCATCACAGAAACTAACATTGTTGGCTCTAGCTGTAGTGCCAATTGTTTCAATTGCTGTAAAAAAGGTTGGTCGCTTTCTACGTGACCTTTCGCTCAGAACTCAAGCAGCAGCTGCATTAGCTGCTTCAGTTGCTGAGGAATCTTTTGGGGCCATTCGAACAGTGAGATCTTTTGCTCAAGAAAGCAAAACAGTATCAACTTATTCAGAAAAAGTTGATGACACCCTAAAACTTGGACTTAGACAAGCTGAAGTTGCTGGTAGTTTTTCAGGAGGAATGAACGCAACAATTGTATTAactattattcttattatctCATATGGAGCATCCCTGGTAATCACAATTTCTATGACTGCTGGCTCTCTAACGTCATTCATCCTCTATAGCCTTACAGTTGGGATATCAGTAGGATCTTTATCAGGGTTATATACAACAGCAGTGAAGGCTGCAGGGGCAAGTCAAAGAGTTTTCTGGCTACTTGAACGTGTCTCTACCATGCCAAAATCAGGAGACAAGTATCCTATGGGCAGTGCAGATGGAGAAGTGGAGCTAGATGATGTTTGGTTTGCTTATCCTTCTCGTCCTAATCATATAGTACTGAAGGGAATAACATTACATTTAAGGCCAGGTTCAAAAGTTGCCCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAATTTGATTCAGAGGTTCTATGACCCTCCTAAGGGAAACATTTTGCTGAATGAGGTTCCCCTCATGGAAATATCCAATGAATATCTTCACAGAAAGGTCAGTATAGTGAGTCAGGagccatttctttttaactgtTCTCTGGAAGAGAACATTGCATATGGACTCGGGAAGAACAAGCTACGGTG 1283 0.3959 MQAMNVGYFKVLSLAKPEAGKLTIGIISLLLTSMSNILIPKYRGEIIDIVSRDMRSLSTALREWLFTSASERVAARLRKELFIHLIHQDIAFFDVTGTGELQSRLSEDTQIIKNAASTNLCDILGNLSTASIGVGFMFSSSQKLTLLALAVVPIVSIAVKKVGRFLRDLSLRTQAAAALAASVAEESFGAIRTVRSFAQESKTVSTYSEKVDDTLKLGLRQAEVAGSFSGGMNATIVLTIILIISYGASLVITISMTAGSLTSFILYSLTVGISVGSLSGLYTTAVKAAGASQRVFWLLERVSTMPKSGDKYPMGSADGEVELDDVWFAYPSRPNHIVLKGITLHLRPGSKVALVGPSGGGKTTIANLIQRFYDPPKGNILLNEVPLMEISNEYLHRKVSIVSQEPFLFNCSLEENIAYGLGKNKLR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00364 427 Gene3D - 315 427 IPR027417 -
Bva04g00364 427 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 56 423 - -
Bva04g00364 427 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 2 56 - -
Bva04g00364 427 Pfam ABC transporter transmembrane region 56 270 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g00364 427 Pfam ABC transporter 339 416 IPR003439 GO:0005524
Bva04g00364 427 SUPERFAMILY ABC transporter transmembrane region 11 300 IPR036640 GO:0005524|GO:0016021
Bva04g00364 427 Gene3D ABC transporter type 1, transmembrane domain 7 310 IPR036640 GO:0005524|GO:0016021
Bva04g00364 427 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 287 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g00364 427 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 56 423 IPR039421 -
Bva04g00364 427 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 56 IPR039421 -
Bva04g00364 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 311 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00364 Bva-Chr4 2158455 2162086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00364 64 420 Calmodulin-binding Proteins AT2G36910 29.722 3.81e-41 154