Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00345 atgttttctttttctgcttctttcaAATGGCGTTTTTTCCACAAACACATGTTCCCTATGCTTGTACTGGAGTTATACTTTCTATCATGGGCTCTTTTCATGTATCAGAGTTACGGGGTTGTGGCCGATTCAGATAAGTCAGTGCTTCTTCAGTTCAGGGGTTCAGTCTCCGACCCATCAGGGCTGCTGTCAAGCTGGAATTCTACTGATTCTGATCACTGTTCCTCTTGGTTTGGTGTCTCCTGCGACTCGCGCTCACGGGTTATGTCTCTCAACATTACTGGAAATGGAAGTGGAGGTAATGGAAATTCTCTTTCATGTTCCAAATTTGCTGATTTTCCGCTATATGGGTTTGGAATTAGGAGATGTGAGGGTAGTAAAGGAACATTGTTCGGGAAGGTTTCTCCTTCGATCAGTAAGCTTACTGAGCTAAGGGTTTTGTCGCTTCCATTCAACGGTTTTGAGGGTGAAATACCTGATGAAATATGGGGTATGGAAAAGTTGGAAGTTCTCGATCTAGAGGGCAACTCCATAACTGGGTCTATTCCATTTCGTTTCACTGGTTTGAAGTATTTGCGGGTTCTTAATCTGGGGTTTAATAAGATTGTGGGGGAGATACCAAGCTCACTTTCAGGTCTTGCACGTTtggaaatattgaatttaGCTGCAAATAACTTAAATGGGTCTGTTCCTGAGTTCATTGGTAACCTGAGAGGagcatatttattgtttaatttgtttagtgGGCCCATTCCAACTGAGATCGGGAAGAATTGTGGGAAGCTCGAGCATCTGGATTTGTCAGGTAATCTTTTAGTCCATGGGATTCCAAGTAGTTTGGGGAATTGTACTCAATTACGGACACTTTTGCTGTATTCAAATATGTTGGAAGAGGTAATTCCGGctgaacttggtaaacttcaGAAGCTTGAAGTGTTGGATGTTTCAAGGAATTGTCTCAGTGGTCCAATACCTTCTGAACTTGGGAAATGTTCAGAACTTTCTGTACTTGTACTGTCAAACCTTTTCATTCCACTTCCAGCAGGGAACAGTACAGAGAGAGACTCTTTACGGGAGGAGCAAATTTCTATAAATGatgaattgaattattttgaagGTGCAATGCCTGAAGAAATTACAAGCCTTCCAAAGCTGAGAATATTATGGGCGCCAAGGGCAACTCTTGAAGGAAGTTTTCCTAGGAGCTGGGGTGCTTGTGATAACTTGGAGATGGTTAATTTGGCACAGAATTATTTCACTGGAGAGTTTTCTAGCCAACTTAGTCAATGCAAGAAGCtgcattttcttgatttgagCTCAAACAATCTTACTGAGGAGTTAGATGAAGAGCTTCCTGTTCCCTGTATGACCGTGTTTGACGTTAGTGGGAACGTCTTATCAGGTTCAGTTCCTGATTTCTCTAATTACACTTGTCCTCCAGTTCCTTCCTTGAACAGAAAACTGTTCGAACCTGATAACTTGTCCCCTCTATATGCTTCCTTTTTTGCGTCCAAGGTTCATGATGGAACCTCTTGGCCATCAGTGGGAGAAATGgatctttcaatttttcacaattttgCACACAACAACTTTTCCAATGTGCAGTCAATGCCAATAGCACCTGACAGACTGGGCAAGCAAACTGTTTACACATTTCTTTTTGGAGAAAACAAGCTCACGGGATCATTTCCTAGAATTTTGTTGGAGAAATGTGAGGGATTGGATGGATTGTTTTTGAATGTCAGTTATAATAGGTTGTCTGGTCCTCTTCCTGCTGACATGGGTAGAATGTGCagatcattaaaatatttggatATCTCTGGGAATCAGATTACAGGACAAGTTCCCATTGGTTCTGGGGAGTTCATGTCACTTATTGCTCTGAACCTCAGTTGGAACCATTTACAAGGAAAGATTCCCGACACCATTGGCCAGATAAAGGATCTGACGTTTCTCTCTTTGGCTGGTAATAACTTGAATGGCTCAATTCCTACCAGTATAGGGCAGTTGTATTCTTTGGAAGTCTTGGATCTTTCTTCAAACTCTCTCACTGGAGATATTCCAACGGTTATTCAAAGCTTGAAAAATCTGACCGCTCTTCTGCTCAATAACAACAAACTTTCTGGACATGTTCCTGCTGGTTTGGCATATGTGACTACGCTCTCATCCTTTAATGTGTCCTTCAATAACTTATCTGGATCCTTGCCATCAAACAGTAACTTGATAAAATGCAGTAGTGCTGTAGGTAATCCACTTATACGATCTTGTCCTATGTATACTCTGACTGTCCCTTCAGCAGATCAGCAAGGGAGGGCTGATGATTCTAGTTCTTATACTGCAACACCTCCAGAAGCTACCAGCAGAAAGAGTGGGAATGGCTTCAATTCAATTGAAATAGCATCAATAACTTCTGCATCGGCCATTGTATCCGTCCTTCTAGCCCtaattgttcttttcttttttacccgGAAGTGGAATCCAAGGTCCAGGGTTACTGGGTCTATGAGAAAAGAAGTTACCGTTTTTACTGATATTGAGGTTCCTTTGACTTTTGAAAATGTTGTCCGTGCCACAGGAAATTTCAATGCAAGCAATTGCATTGGGAATGGAGGATTTGGGGCAACCTACAAGGCTGAGATTTCATCAGGAGTTTTAGTGGCAATAAAACGTCTGGCAGTTGGACGATTCCAAGGTGTTCAACAGTTTGATGCTGAGATTAAGACCCTTGGAACGCTTCGTCATCCAAATCTTGTCACTCTGATTGGTTATCATGCTAGTGAGGCAGAGATGTTTCtcatttacaattatttacCTGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCCACAAGGGCTGTGGATTGGAGAATACTTCACAAGATTGCATTGGACATAGCCCGTGCACTTGCATACATGCATGATGTGTGTGTACCACGGGTCCTTCATCGTGACGTGAAGCCCAGCAATATCTTGTTGGATGATGATTTCAATGCTTATCTTTCAGATTTTGGATTGGCCAGACTTCTGGGAACTTCTGAAACACATGCTACCACTGGTGTAGCAGGAACATTTGGCTATGTCGCCCCCGAATATGCCATGACATGCCGTGTTTCTGATAAGGCCGATGTGTATAGTTATGGTGTGGTGCTTATGGAATTACTCTCAGACAAGAAGGCATTAGATCCTTCGTTTTCTTCCTATGGGAATGGTTTCAACATTGTACAATGGGCATGCATGCTACTGCGGCAAGGCCGGGCAAAAGAGTTCTTCACTGCTGGATTATGGGATGCAGGACCTCCAAATGATTTGGTAGAAGTCCTACACTTGGCCGTTATGTGTACGGTTGATTCCCTCTCTACCAGACCTTCGATGAAACATGTTGTAAGACGGCTAAAACAACTTCAACCGCTCCCTTG 3419 0.4074 MFSFSASFKWRFFHKHMFPMLVLELYFLSWALFMYQSYGVVADSDKSVLLQFRGSVSDPSGLLSSWNSTDSDHCSSWFGVSCDSRSRVMSLNITGNGSGGNGNSLSCSKFADFPLYGFGIRRCEGSKGTLFGKVSPSISKLTELRVLSLPFNGFEGEIPDEIWGMEKLEVLDLEGNSITGSIPFRFTGLKYLRVLNLGFNKIVGEIPSSLSGLARLEILNLAANNLNGSVPEFIGNLRGAYLLFNLFSGPIPTEIGKNCGKLEHLDLSGNLLVHGIPSSLGNCTQLRTLLLYSNMLEEVIPAELGKLQKLEVLDVSRNCLSGPIPSELGKCSELSVLVLSNLFIPLPAGNSTERDSLREEQISINDELNYFEGAMPEEITSLPKLRILWAPRATLEGSFPRSWGACDNLEMVNLAQNYFTGEFSSQLSQCKKLHFLDLSSNNLTEELDEELPVPCMTVFDVSGNVLSGSVPDFSNYTCPPVPSLNRKLFEPDNLSPLYASFFASKVHDGTSWPSVGEMDLSIFHNFAHNNFSNVQSMPIAPDRLGKQTVYTFLFGENKLTGSFPRILLEKCEGLDGLFLNVSYNRLSGPLPADMGRMCRSLKYLDISGNQITGQVPIGSGEFMSLIALNLSWNHLQGKIPDTIGQIKDLTFLSLAGNNLNGSIPTSIGQLYSLEVLDLSSNSLTGDIPTVIQSLKNLTALLLNNNKLSGHVPAGLAYVTTLSSFNVSFNNLSGSLPSNSNLIKCSSAVGNPLIRSCPMYTLTVPSADQQGRADDSSSYTATPPEATSRKSGNGFNSIEIASITSASAIVSVLLALIVLFFFTRKWNPRSRVTGSMRKEVTVFTDIEVPLTFENVVRATGNFNASNCIGNGGFGATYKAEISSGVLVAIKRLAVGRFQGVQQFDAEIKTLGTLRHPNLVTLIGYHASEAEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYMHDVCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLMELLSDKKALDPSFSSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPPNDLVEVLHLAVMCTVDSLSTRPSMKHVVRRLKQLQPLP 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00345 1139 Gene3D Transferase(Phosphotransferase) domain 1 937 1136 - -
Bva04g00345 1139 Gene3D Ribonuclease Inhibitor 350 485 IPR032675 -
Bva04g00345 1139 Pfam Protein kinase domain 864 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00345 1139 Gene3D Ribonuclease Inhibitor 41 238 IPR032675 -
Bva04g00345 1139 Pfam Leucine Rich Repeat 261 283 IPR001611 GO:0005515
Bva04g00345 1139 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Bva04g00345 1139 ProSitePatterns Protein kinases ATP-binding region signature. 867 889 IPR017441 GO:0005524
Bva04g00345 1139 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 21 1136 - -
Bva04g00345 1139 PRINTS Leucine-rich repeat signature 601 614 - -
Bva04g00345 1139 PRINTS Leucine-rich repeat signature 670 683 - -
Bva04g00345 1139 Pfam Leucine rich repeat 186 226 IPR001611 GO:0005515
Bva04g00345 1139 Pfam Leucine rich repeat 649 707 IPR001611 GO:0005515
Bva04g00345 1139 Gene3D Ribonuclease Inhibitor 239 349 IPR032675 -
Bva04g00345 1139 Gene3D Ribonuclease Inhibitor 525 760 IPR032675 -
Bva04g00345 1139 Gene3D Phosphorylase Kinase; domain 1 824 936 - -
Bva04g00345 1139 SMART serkin_6 861 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00345 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672|GO:0006468
Bva04g00345 1139 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 1136 - -
Bva04g00345 1139 MobiDBLite consensus disorder prediction 767 789 - -
Bva04g00345 1139 CDD STKc_IRAK 867 1135 - -
Bva04g00345 1139 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Bva04g00345 1139 SMART LRR_typ_2 259 283 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 189 212 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 213 237 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 670 693 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 307 331 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 165 188 IPR003591 -
Bva04g00345 1139 SMART LRR_typ_2 694 718 IPR003591 -
Bva04g00345 1139 Pfam Leucine Rich repeat 598 613 IPR001611 GO:0005515
Bva04g00345 1139 SUPERFAMILY Protein kinase-like (PK-like) 844 1132 IPR011009 -
Bva04g00345 1139 SUPERFAMILY L domain-like 236 738 - -
Bva04g00345 1139 SUPERFAMILY L domain-like 135 253 - -
Bva04g00345 1139 ProSiteProfiles Protein kinase domain profile. 861 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00345 1139 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00345 Bva-Chr4 2063941 2067729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00345 21 1137 Receptor kinase-like Gene Family AT3G02130 64.695 0.0 1364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Bva04g00345 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00345 - - gmx:100803891 1585.85