LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva04g00342	ATGGAAAAGAAGCAGATCTTTGTTCATGATCTTTTATTGCTTCTTTTGTTCATGGTCATACTCAGAGGAGCAAAAGcagggaaagaagaagaagaagctgacaGGATCTTTGAACTCCCAGGGCAACCCAAAGTCTCTTTTCAGCAGTTCTCTGGCTATGTCACTGTGAATCATGTTGCTGGTAGAGCCCTCTTTTACTGGCTCactgaagctactcaaaacccCTTGACCAAACCACTGGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCGTCGGTGGCATATGGAGCGTCCGAAGAGATAGGTCCATTCCGAATAAATAAAACAGCTTCAGGACTGTACCTTAACAAGTTCTCATGGAACACCGTCGCCAACCTCTTGTTCTTGGAGACTCCGGCCGGCGTCGGCTTCTCTTACAGCAACCGGTCATCGGACCTGCTCGACACCGGCGACCGGCGCACAGCCAAAGATTCTCTAGAGTTTGTAATTCAATGGCTAGAACGATTTCCACGTTATAAGAATCGAGAAGTTTATATCACCGGAGAGAGCTACGCAGGCCATTATGTCCCTCAATTAGCCAAAGAAATCATGAACTACAACAAAAAGGCTAAGCATCCAATCAACCTCAAGGGAATCATGGTTGGCAATGCAGTCACGGACAATTACTATGATAACTTAGGCACGGTCACGTACTGGTGGAGTCACGCTATGATCTCCGATCGGACTTACCGGCGACTCATAAACACGTGTGATTTTCACCGGCAAAAGAGTTCCGATGAGTGTGAATCATTGTATAGTTATGCTATGGATCAAGAGTTCGGTAAGATTGATCAGTACAACATCTATGCACCTCCATGCAACGTTAAATCAGATGATAGCTCCGGCTCCACCCGCCACACCATGCACTTGCCTCACCATCCTCATCATCCGATTTTTAGGACAATGGCTGGCTATGATCCCTGTACGGAAAAATATGCTGAGATTTACTACAACAGGCCAGATGTTCAGAAAGCACTTCATGCTAACACAACTGGTATTCCTTACAAGTGGACTGCTTGCAGTGAGATTTTGAATCGTAATTGGAATGATACAGATGTATCTGTTCTTCCAATTTACAAGGAGTTGATAGCTCATGGAGTAAGAGTTTGGGTTTTcagTGGGGATGTTGACTCTGTGGTGCCAGTAACAGCAACTAGGTATGCCCTTGCAGGGCTGAAATTGACAACCAAAACTTCATGGTACCCTTGGTATGTTAAGAATCAGGTTGGAGGGTGGACAGAAGTATATGAGGGGCTAACATTTGCAACAGTGAGAGGAGCAGGCCATGAAGTTCCACTGTTCAAGCCCAGAGAAGCCCTTCAATTATTCAAATCATTTCTTGCAGGAAAGCCTCTTCCAAAGTCCTG	1406	0.4395	MEKKQIFVHDLLLLLLFMVILRGAKAGKEEEEADRIFELPGQPKVSFQQFSGYVTVNHVAGRALFYWLTEATQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNTVANLLFLETPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIQWLERFPRYKNREVYITGESYAGHYVPQLAKEIMNYNKKAKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDRTYRRLINTCDFHRQKSSDECESLYSYAMDQEFGKIDQYNIYAPPCNVKSDDSSGSTRHTMHLPHHPHHPIFRTMAGYDPCTEKYAEIYYNRPDVQKALHANTTGIPYKWTACSEILNRNWNDTDVSVLPIYKELIAHGVRVWVFSGDVDSVVPVTATRYALAGLKLTTKTSWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPREALQLFKSFLAGKPLPKS	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva04g00342	468	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	14	467	IPR001563	GO:0004185\|GO:0006508
	Bva04g00342	468	Gene3D	alpha/beta hydrolase	30	288	IPR029058	-
	Bva04g00342	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	432	445	IPR001563	GO:0004185\|GO:0006508
	Bva04g00342	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	165	190	IPR001563	GO:0004185\|GO:0006508
	Bva04g00342	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	129	139	IPR001563	GO:0004185\|GO:0006508
	Bva04g00342	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	116	128	IPR001563	GO:0004185\|GO:0006508
	Bva04g00342	468	Gene3D	-	368	462	-	-
	Bva04g00342	468	SUPERFAMILY	alpha/beta-Hydrolases	38	466	IPR029058	-
	Bva04g00342	468	Gene3D	-	321	358	-	-
	Bva04g00342	468	ProSitePatterns	Serine carboxypeptidases, histidine active site.	432	449	IPR033124	GO:0004185
	Bva04g00342	468	ProSitePatterns	Serine carboxypeptidases, serine active site.	179	186	IPR018202	GO:0004185
	Bva04g00342	468	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	14	467	-	-
	Bva04g00342	468	Pfam	Serine carboxypeptidase	41	461	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva04g00342	Bva-Chr4	2041613	2048829	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva04g00342	326	465	Calmodulin-binding Proteins	AT2G22960	31.915	1.27e-17	79.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva04g00342	K16297		-	gmx:100807680	825.854