Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00340 ATGGCCATGGAGGAATCTGAGCCTGCGAGTCCACAGctagaaagagaagaaaacctAATTGCTGCAGCGAGACATATTGTGAAAGCACTAGGATCAAGTAAGAATCTTACTAGCGATGCCAAGAAAGTTCTGGCTGAACTTGGCACCCAATTGTCTTCCATGACCAAACTCAGAGACatggaggaggaagaagagggaGAGGTGAAGGAGGAGGGAGTTAGTGCAAGTGAAGGCAGGCTTAATGCTATTGAggagaaaattatgaaatgggAGGAGGATATGTCTATGATTTGGGATTCAGGACCAGATGAAGCATCTGAATATCTGACTGCTGCTGATGAAGCTCGCCAATTGATTGAAAGGTGGGAGAGTATGCATCTGGACAAAGAGGACCAAGAGTATAAGCTCTTGCTGAGGGCTTATAGTGTTCTCCAAACAGCAATGGCACGGCTTGAAGAAGAGTTCAGGTACTTGATTATCCAGCACAGGCAGCCTTTCGAACCCGAGTATGTTTCTTTTCGATCCATTGAAGAAGATGTGGTCGATCAGAGCTCCATAGTCTCATTAGGTGATGAATCGATTGAGGAATCACCCCGGAGAGATGGTTCCTGCAGACCCTCGGAGGAGCATGCCATTGATTTGGTTCATCCAGATGTGATCTCTGAGCTCAGGTATATTGCAACCTTAATGTTTGCCTCAAATTATGATCAGGAATGTTCACATGCCTACACCACCGTCCGGAGAGATGCCTTAGATGAATGCCTCTCCATTCTTGAAGTGGAAAGACTGAGCATTGAGGATGTCTTGAAAATGGAGTGGGTCACTCTGAACTCCAGAATCAAAAGGTGGATTTGGGCTGTGAAAATCTTTGTCAGAGTATATCTTGCTAGTGAGAGGTGGCTCAGTGACCAAGTTTTTGGGGAGGGGCAACCAATTAGTCTAGCTTGTTTTGTTGATGCATCAAAGGCTTCCATATTGCAGCTTTTGAATTTTAGTGAAGCTATGTCCATTGGCCCACACCAACCTGAGAAACTGATTCGCATTCTGGACATGTACGAGGTTCTAGCAGACCTTATCCCTGACATAGATACTTTGTATCCAGATGATGTTGGTTCTTCTGTTAGAATTGAATGCCATGAGGTTCTAAAGAGATTAGGTGACTGTGTGAGGGCAACatttcttgaatttgaaaatgccATTGCATCAAATGCATCGGTGACTCCTTTCGTAGGTGGTGGGATTCATCCTTTAACCAGATATGTCATGAATTATATGAGGACTCTTACCGATTACAGCGAGACCCTTAATCTGCTTTTGAAGGATCCTGGGGAAGAGGATGCCGTTTCATTCTCACCTGACATGAGCCCTGATACAGAAGACAGCAAAAGCCAGGATTCATCTCCAGGAAGGATTTCCTCAATGGTGCTCCACTTTCGGTCGGTGGCTTCAATCCTGGAATGCAACCTTGATGAAAAGTCTAAGCTTTACAGGGAACCACCCTTGCAGCACTTGTTCTTAATGAACAATATACATTACATGGCTGAAAAGGTTAAGGGATCTGAACTTAGGCTCATATATGGAGATGAATGGATCCGAAGGCACAACTGGAAATTTCAACAGTATGCCATGAATTATGAGAGAGCCAGTTGGAGTTCCATTCTGTCCTTGCTCAAGGATGAGGGAATTCAAACTCCAGGAACAACTTCCATCTCAAGAAACCTTCTTAAGGAGAGGTTAAGGAGCTTCTACCTTGCCTTTGAAGATGTCTATAGGATCCAAACAGCTTGGCTCATCCCAGATATTCAGCTTCGCGAAGACTTGCGAATCTCTATATCCCTTAAGGTGATTCAAGCTTATAGGACATTTGTAGGGAGACATAGTACTCACATAAGTGACAAACACATTAAATACAACGCTGATGATTTAGAAAAATTCCTTTTGGATTTCTTCGAAGGGTCGCTCAAATCATTGCAAAGTCCCCACAAGAGATG 1991 0.4234 MAMEESEPASPQLEREENLIAAARHIVKALGSSKNLTSDAKKVLAELGTQLSSMTKLRDMEEEEEGEVKEEGVSASEGRLNAIEEKIMKWEEDMSMIWDSGPDEASEYLTAADEARQLIERWESMHLDKEDQEYKLLLRAYSVLQTAMARLEEEFRYLIIQHRQPFEPEYVSFRSIEEDVVDQSSIVSLGDESIEESPRRDGSCRPSEEHAIDLVHPDVISELRYIATLMFASNYDQECSHAYTTVRRDALDECLSILEVERLSIEDVLKMEWVTLNSRIKRWIWAVKIFVRVYLASERWLSDQVFGEGQPISLACFVDASKASILQLLNFSEAMSIGPHQPEKLIRILDMYEVLADLIPDIDTLYPDDVGSSVRIECHEVLKRLGDCVRATFLEFENAIASNASVTPFVGGGIHPLTRYVMNYMRTLTDYSETLNLLLKDPGEEDAVSFSPDMSPDTEDSKSQDSSPGRISSMVLHFRSVASILECNLDEKSKLYREPPLQHLFLMNNIHYMAEKVKGSELRLIYGDEWIRRHNWKFQQYAMNYERASWSSILSLLKDEGIQTPGTTSISRNLLKERLRSFYLAFEDVYRIQTAWLIPDIQLREDLRISISLKVIQAYRTFVGRHSTHISDKHIKYNADDLEKFLLDFFEGSLKSLQSPHKR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00340 663 Coils Coil 73 93 - -
Bva04g00340 663 Coils Coil 134 154 - -
Bva04g00340 663 MobiDBLite consensus disorder prediction 446 469 - -
Bva04g00340 663 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 655 - -
Bva04g00340 663 MobiDBLite consensus disorder prediction 56 76 - -
Bva04g00340 663 SUPERFAMILY Cullin repeat-like 92 651 IPR016159 -
Bva04g00340 663 Pfam Exo70 exocyst complex subunit 281 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva04g00340 663 Gene3D Exocyst complex component Exo70 88 659 - -
Bva04g00340 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 655 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00340 Bva-Chr4 2030411 2033111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00340 12 663 EXO70 exocyst subunit family AT3G29400 49.774 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00340 K07195 - gmx:100799102 1019.22