Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00314 ATGCCGGccactctcttctctcttgttAGGTGGATTTGTGGCGGGAAGGATTGTCGAAGTAGCAGTAGCAGTGGCGGGGAGAGTAGCAACGACGTCGTTGTGGATGACAATATAATCTCCAATTCAGTGGAGTGCTATGCTTGTACTCAAGTTGGGGTACCTGTGTTCCACTCCACCAGCTGCGACCGTGCTCACCATCCACAATGGGAGGCTTCTGCTGGCTCTTCATTGATCCCAATTCAGAACCGAGTCGAGAACCGGACTCGCCTCGTCTCCCGACCCAGCTCAGGACCGTTCGAGAAAGTGCTTGACCCGCGAAGCAAGCGCGTTCAGAAATGGAACCGCGCTTTCTTGTTGGCGCGTGGGATGGCGCTGGCTATAGACCCGTTGTTCTTCTACGCGCTGTCGATAGGAAGAAACGGAACACCGTGCCTGTACATGGATGGCGGTTTGGCGGCGGTGGTGACGGTGCTTCGTACGTGTGTGGACGGCGTGCACATATTTCATTTGTGGCTGCAGTTTCGGCTTGCTTATGTGTCAAGGGAGTCTCTGGTGGTGGGCTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCTTCCCATTATTTGCGGTCCCTCAAGGGATTTTGGTTCGACGCCTTCGTGATCCTCCCCGTCCCTCAGGCGGTGTTTTGGTTAATAGTACCAAAATTGATAAGAGAAGagcaaattaaaatgataatgacGATGCTACTATTGATATTCTTGTTCCAATTTCTCCCAAAGGTTTACCATTGCATTTGCTTGATGAGAAGAATGCAAAAGGTCACAGGCTACCTATTTGGCACCATTTGGTGGGGTTTTGGCCTCAACCTCATAGCTTACTTCATCGCTTCTCATGTTGCCGGAGGCTGCTGGTATGTCCTTGCAATTCAACGAGTTGCGTCGTGCCTCCGGCAACAGTGTGAACGAGGTACAAATTGCAATCTGTCTCTATCGTGCTCAGAGGAGGTGTGCTACCAGTTTATTCTACCAACAGGAACTGTGGGAAATCCATGTGGTGGAAACTCAACAGTAGTGATGAGAAAGCCATTGTGCTTAGATGTTAAAGGACCTTTCAAGTTTGGGATCTACCAATGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTTTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACCTTTGGCAATGATCTTGAACCCACAAATCACTGGCTAGAAGTGATTTTCAGCATATGCATTGTGCTAAGTGGGCTTTTGCTGTTCACTCTGTTGATTGGTAACATACAGGTGTTCTTACACACAGTTATggcaaagaagagaaaaatgcagCTAAGATGCCGAGACATGGAATGGTGGATGAGGAGGAGACAGCTTCCATCACGTTTACGCCAAAGAGTTCGCCATTTTGAACGCCAGAGATGGGTAGCCATGGGAGGAGAATTGGATGAAATGGAAATCATCAAAGACTTGCCTCAAGGGCTCAGGAGAGACATCAAGCGCTATCTTTGTCTAGATCTCATAAAAAAGGTTCCTCTGTTCCACAATATGGATGATCTTATTCTTGACAACATCTGTGATAGGGTCAAGCCCCTTGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGGGACCCGGTACCAAGGATGGTGTTCATAGTCCGGGGACGCATAAAACGGCACCAAAGCCTAAGCAAAGGCATGGTGGCGACGAGCATGATTGAAGCAGGAGGGTTTTTGGGTGATGAGCTGCTCTCCTGGTGCCTCCGCCGACCGTTTATAGACCGGCTGCCAGCATCATCTGCGACATTTGTTTGTGTTGAATCAACAGAAGCCTTTGGCCTTGATGCAGACAATCTAAGGTACATCACTGATCACTTCCGTTACAAATTCAACAACGAGAGACTCAAGAGAACAGCAAGGTATTACTCGTCAAATTGGCGAACCTGGGCTGCTGTCAACATCCAATTGGCTTGGCGACGTTACAGGCAGAGGACCGGAGGTCCGGTGATCCCTGTAATGGACGTGAATGCCACAGAACGCCGCCTCTTGCAGTATGCTGCAATGTTCATGTCAATTAGGCCACATGACCATCTtgaatg 2120 0.4755 MPATLFSLVRWICGGKDCRSSSSSGGESSNDVVVDDNIISNSVECYACTQVGVPVFHSTSCDRAHHPQWEASAGSSLIPIQNRVENRTRLVSRPSSGPFEKVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALSIGRNGTPCLYMDGGLAAVVTVLRTCVDGVHIFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYLRSLKGFWFDAFVILPVPQAVFWLIVPKLIREEQIKMIMTMLLLIFLFQFLPKVYHCICLMRRMQKVTGYLFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERGTNCNLSLSCSEEVCYQFILPTGTVGNPCGGNSTVVMRKPLCLDVKGPFKFGIYQWALPVISSNSLAVKIFYPIFWGLMTLSTFGNDLEPTNHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHTVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWVAMGGELDEMEIIKDLPQGLRRDIKRYLCLDLIKKVPLFHNMDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRHQSLSKGMVATSMIEAGGFLGDELLSWCLRRPFIDRLPASSATFVCVESTEAFGLDADNLRYITDHFRYKFNNERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTGGPVIPVMDVNATERRLLQYAAMFMSIRPHDHLE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00314 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 706 - -
Bva04g00314 706 Pfam Ion transport protein 113 436 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva04g00314 706 Gene3D - 143 442 - -
Bva04g00314 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 45 706 - -
Bva04g00314 706 SUPERFAMILY cAMP-binding domain-like 445 633 IPR018490 -
Bva04g00314 706 SUPERFAMILY Voltage-gated potassium channels 104 439 - -
Bva04g00314 706 CDD CAP_ED 519 629 IPR000595 -
Bva04g00314 706 Gene3D Helix hairpin bin 444 510 - -
Bva04g00314 706 ProSiteProfiles cAMP/cGMP binding motif profile. 519 629 IPR000595 -
Bva04g00314 706 Gene3D Jelly Rolls 517 635 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00314 Bva-Chr4 1894059 1897870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00314 41 706 Ion Channels AT5G15410 79.764 0.0 1063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00314 04 1894059 1897870 Bva04g00314 04 1894059 1897870 ECH