Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00310 ATGGTGATTGGATCATGCATTGACAAAGGAAGTTCAAGTTGCATACTTGTTGAGAAGGGAGTTCAGTTCATTAAGAACATCACACGCGGTGGCCGGCCGGAGCCAAAAACATACTACTACATCTCCGGTGGAGGTTACGGTTATCAAGGAATGATAGTCCTCGTGTCTGTTCAAGAACACGTACCCACCAGCAGCAACTCCGGCAATCCTTTGACTATATCTTCTGGCAATAAGATTGTTCTGCGCAGAACACTGATCTTGAAACTTCTGAACGAAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTTTGGCTACAGATGGCGTAAGTATGGGCAGAAAGTGGTCAAGGGAAATCCTTATCCAAGAGCTATTACAAGGGCAATAGTTCAGGATGCAATGTGCGTAAGCCTGTCGAGAGAGCTTCAACAGACTCCAAAGCTGTCATTAACTGTCTATGAGGGAAAGCATAATCATGGCATATTGTA 488 0.4385 MVIGSCIDKGSSSCILVEKGVQFIKNITRGGRPEPKTYYYISGGGYGYQGMIVLVSVQEHVPTSSNSGNPLTISSGNKIVLRRTLILKLLNEKSLCKQEVKLIFGYRWRKYGQKVVKGNPYPRAITRAIVQDAMCVSLSRELQQTPKLSLTVYEGKHNHGIL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00310 162 ProSiteProfiles WRKY domain profile. 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g00310 162 Gene3D WRKY domain 96 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g00310 162 Pfam WRKY DNA -binding domain 105 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g00310 162 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g00310 162 SUPERFAMILY WRKY DNA-binding domain 105 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g00310 162 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 99 161 - -
Bva04g00310 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 161 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00310 Bva-Chr4 1878912 1882377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00310 73 161 WRKY Transcription Factor Family AT2G03340 39.326 1.18e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g00310 WRKY 3.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00310 - - ath:AT2G03340 69.3218