Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00305 ATGGCTGCATCAACTGGCCAAGGTGGCAGTGGCATTGACACGTgcttacaaaattataagttgAGAAAAACACTTGGGATTGGAACTTTTAGCCAGGTTAAACTTGCAGAGCATGTACTGACTGGTCATAACGTTGccataaaaattcttaacagCCACAGGATAAGGAACGTGGGAATAGAAGAAAGAGTGAGAAGAGGAATCAATATTTTACGGTTGTTGATGCATCCTCACATTATACAACTTTATGACGTGGTGGAAACACcaacagatatatatatttttatggagTATGCAAAATCTGGACAGCTCTTCGACTACATAGTAGAGAAGGGTAGGTTGCAAGAAGATGAAGCTCGCAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTCCATAGAGACCTGAAGCCTGAGAATTTACTTTTGGACTCCAACCACAATGTGAAGATTGCTGGTTTTGGTTTGAGCAATATTATGCGTCATGGTCAACTTTTTAAGACCAGTTGTGGAAGCGCAAACTATGCTGCTCCAGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTGGATGTCTGGAGTTGTGGTGTGATTTTATATGCTCTTCTTTGTGGCACCCTTCCTTTTAATGATGAAAACCTTCCAAATctcttcaagaaaataaagGGTGGGATTTACGCTCTTCCTAGTCATCTTTCTCCTGGTGCTAGAGATTTGATACAAAGGACGCTTGAGGTAGATCCTACGAAGAGGATAACCATACCTGGAATCTGCCAGCATCCATGGTTCCAAGCTGGTCTCCCTCGTCTGTG 836 0.3947 MAASTGQGGSGIDTCLQNYKLRKTLGIGTFSQVKLAEHVLTGHNVAIKILNSHRIRNVGIEERVRRGINILRLLMHPHIIQLYDVVETPTDIYIFMEYAKSGQLFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSNHNVKIAGFGLSNIMRHGQLFKTSCGSANYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFNDENLPNLFKKIKGGIYALPSHLSPGARDLIQRTLEVDPTKRITIPGICQHPWFQAGLPRL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00305 278 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00305 278 SUPERFAMILY Protein kinase-like (PK-like) 16 272 IPR011009 -
Bva04g00305 278 PIRSF STPK_Pim-1 5 277 IPR017348 GO:0004674|GO:0006468|GO:0043066
Bva04g00305 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bva04g00305 278 PANTHER SERINE/THREONINE KINASE 8 275 - -
Bva04g00305 278 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00305 278 CDD STKc_AMPK_alpha 18 271 - -
Bva04g00305 278 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Bva04g00305 278 Gene3D Transferase(Phosphotransferase) domain 1 10 277 - -
Bva04g00305 278 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 275 - -
Bva04g00305 278 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00305 Bva-Chr4 1854679 1857065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00305 19 272 CBL-interacting serine-threonine protein kinases AT5G35410 46.667 1.08e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Bva04g00305 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00305 K07198 - bvg:104902194 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00305 04 1854679 1857065 Bva04g00305 04 1854679 1857065 ECH