Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00304 ATGGTTTCTCCCTCCGTTCTCTCTTCTGCTCTCAATCCAGAAGAACAGCGTATACCATTTAATCAAAGCCACAAGCTCGCTGATCTGAAAATGGATGGATCAAATGCCCGAGGTGGTAGTGGCGTGGACATGTTCTtaccaaattataaattgggAAAAACACTTGGGATTGGATCCTTTGGCAAGGTTAAAATTGCAGAGCATGTACTGACTGGTCATAAAGTTGCCATTAAGATTCTTAACCGCCGCAAGATAAGGAACatggaaatggaagaaaaagTGagaagagaaatcaaaattttaaggttgTTCATGCATCCTCACATTATACGACTTTATGAGGTAGTAGAAACACCAACAGATATATATGTCGTCATGGAGTATGTGAAATCTGGAGAGCTCTTTGACTACATAGTAGAGAAGGGTAGGTTGCAAGAAGATGAAGCTCGCAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTCCATAGAGACCTGAAGCCTGAGAATTTACTTTTGGACTCCAAATGCAATGTGAAGATTGCTGATTTTGGTTTGAGTAATATCATGCGTGATGGACACTTTCTTAAGACTAGTTGTGGAAGCCCAAACTATGCTGCTCCAGAGGTTATCTCTGGGAAGTTGTATGCTGGACCTGAGGTAGATGTGTGGAGTTGTGGTGTGATTTTATATGCTCTTCTTTGTGGAACCCTTCcttttgatgatgaaaacaTTCCAAATctctttaagaaaataaagGGTGGGATTTACACTCTTCCAAGTCATCTATCTCCTGGTGCTAGGGATTTGATACCAAGGATGCTTGTGGTAGATCCTATGAAGAGGATGACCATACCTGAGATCCGCCAACATCCATGGTTCCAAGCTCGTCTCCCACGTTATTTAGCTGTGCCACCACCAGATACAATGCAACAAGCCAAAAagATTGACGAGGAGATTCTTCAGGAGGTGGTTGCTATGGGATTTGACAGGAACCAATTGGTTGAATCTCTTTCCAATAGAATACAAAATGAGGGTACTGTAGCTTACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACTGTGGAATCTGGTTATAACCGTATGCATCCCAGCGAAGCTACCACTCCAGCTGTTGGACGCTTTCCAGGGTACATGGATTATCAGGGAATTGGAGGAAGAACTCAGTACCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCACATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAGTTAAATGTGCGTTGGAAGAAGATTGGACACTACAACATGAAGTGCAGGTGGGTTGCTGGCATTCCTGGTCATCATGAAGGAATGGTTGACAATGCTGCGCATAGTAATCATTACTTTGGAGACGACTCCACCATTATCGAGAATGATGCTGCTTCTAAGTCAAAAGtggtcaagtttgaagtgCAGCTTTACAAAACACGTGATGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCTCAGTTTCTCTTCTTGGACCTTTGTGCTGCTTTCCTTGCGCAGCTTCGTGTCCTGTA 1631 0.4102 MVSPSVLSSALNPEEQRIPFNQSHKLADLKMDGSNARGGSGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIRNMEMEEKVRREIKILRLFMHPHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVAMGFDRNQLVESLSNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETVESGYNRMHPSEATTPAVGRFPGYMDYQGIGGRTQYPVERKWALGLQSRAHPREIMTEVLKALQELNVRWKKIGHYNMKCRWVAGIPGHHEGMVDNAAHSNHYFGDDSTIIENDAASKSKVVKFEVQLYKTRDEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00304 543 Pfam Protein kinase domain 49 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00304 543 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Bva04g00304 543 SUPERFAMILY UBA-like 311 360 IPR009060 GO:0005515
Bva04g00304 543 CDD STKc_AMPK_alpha 46 301 - -
Bva04g00304 543 CDD UBA_SnRK1_plant 323 363 - -
Bva04g00304 543 Gene3D Transferase(Phosphotransferase) domain 1 40 379 - -
Bva04g00304 543 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 38 542 - -
Bva04g00304 543 SMART uba_6 324 361 IPR015940 -
Bva04g00304 543 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 494 542 IPR001772 -
Bva04g00304 543 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 322 362 IPR015940 -
Bva04g00304 543 PANTHER SERINE/THREONINE KINASE 38 542 - -
Bva04g00304 543 Gene3D Kinase associated domain 1, KA1 424 541 - -
Bva04g00304 543 ProSiteProfiles Protein kinase domain profile. 49 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00304 543 Pfam UBA/TS-N domain 323 359 IPR015940 -
Bva04g00304 543 CDD AMPKA_C 418 540 - -
Bva04g00304 543 SUPERFAMILY KA1-like 358 542 IPR028375 -
Bva04g00304 543 SMART serkin_6 49 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00304 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Bva04g00304 543 Pfam Kinase associated domain 1 500 542 IPR001772 -
Bva04g00304 543 SUPERFAMILY Protein kinase-like (PK-like) 46 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00304 Bva-Chr4 1846907 1853956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00304 49 301 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 1.93e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Bva04g00304 Pkinase 1.3e-80 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00304 K07198 - gmx:100796687 967.992