Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00274 ATGATTGCCCAACTCAATCATCTTCGTCTTTTCTCTCCCACTATGCATCAAAAACCAATTACGACCCAAAACCCATTTTTAGACTCTGTCAAAATCCAATGCTTTCCAAGTTTCGGAGCTTTTCATATTTCTGAAGTTTCCGTTGTGATTGTGGGTTCTATGCAATCTCCTAGCTGTCGGGTTTCTCGGGTAGAAATGACTGAAGCTCAGGATGTGCTGTCAGCTTACCTGCATTCTACCCGAGGCTACAGTTTTCTCGATGCCGAATACATTAGCAAGAATTCACCACATTTTCTCCAAACTTTGGTTTCCAGCATCCATGTAAAGGAAGGTGTTGCTCGTTCTTTACGCAAGTTTCTCAGGTACAACCCCATTAACGAGTTTGAGCCTTTTCTTGAGAGTTTGGGTGTTAGCCCTTCTGAGCTCCCTTTGCTTATGCCTCGTGGAATGCATTTTTTGAGTGATGATTATGCTATGCTTGAAACTTTTCATGCTTTATCCAATTATGGGATTCCTCGTAATATAATGGGGAAAATTTATAAGGAAGCAAGAGAGGTTTTTGGGTATGGTAGTGTGTTATTGTCTAAGAAATTTCGAGCATATGAAAATTTGGGTTTGAGTAAATCCACAGTTATCAAGCTTGTTAGTTCTTGTCCTGAACTTTTGCTAGGTGACTTGAACAGTGAATTTGCCATGGTTCTTGATTGGTTGAAGAAAATAGGGATTGAAAATGATTGGATGGGGAAATACTTGTCATATGAAAGAACTTATGACTGGGAAAGGATGCTTGATACTATTGAATTCTTTGATAAAGTTGGTTATTCTGGTAAACATATGCTCAATTTGTTTAAGACAAGTCCTGCATTACTGTTTGAAGGATGTGGGAAGATGGTGTATGTCTTATTTGGCAGATTATTTAAGTCAGGTCTCAAGACGAATGTGattcattcttcttttatacAAAATCCCTGTCTCATGTCAAATAAGTGTTCgaaaaatcttttgaaagtggttgattttttatatgatattggAATGGGATCAGAGGCTATTGCTCATATTATGTCTAATCACATGCAGCTCCTAAGTGCACATTCCTTGAAAGGACCTAAAACTGTTTGCCGAGTGctgaaagttaaaaaaactGATTTATGTCAAATCATAAGTGATGATCCACTGAAACTGATCAGTTTggcttcaaaatcaaaacagaaGTGTGCAAAGCAGCTATCTCAAGACCTGACTAATCATatggagaaaacaaaattcttgttGAAATTGGGGTATGTCGAGAACTCAGAGGAGATGGAAAAGGCATTAAAAAAGTACCGAGGGAGAGGTGACCAATTACAGGAGAGGTTTGATTGCCTGGTAGCAGCTGGTTTGGACTATAACATTGTGActgaaatgataaaaagagCTCCTATGATTCTAAATCAGAGCAAAGATATCATTGAAAAGAAGATCGATTGCTTGAGAAATATTTTAGGTTACCCATTAGAAAGTTTGGTGGCATTCCCATCATACTTATGCTATGATTTGGAGAGAATTATTCAAAGATTTTCAATGTATGCGTGGCTCAAGGAGAGAGGTGCGGCAAAGCCCATGTTGACTTTGAGTACCATACTTGTATCTTCAGATGAACGGTTTGTAAAATACTTTGTAAATGTGCACCCCGAAGGTCCGAATGTCTGGGAAGGTCTAAAGAACTTAACGCCTTcaacata 1727 0.3602 MIAQLNHLRLFSPTMHQKPITTQNPFLDSVKIQCFPSFGAFHISEVSVVIVGSMQSPSCRVSRVEMTEAQDVLSAYLHSTRGYSFLDAEYISKNSPHFLQTLVSSIHVKEGVARSLRKFLRYNPINEFEPFLESLGVSPSELPLLMPRGMHFLSDDYAMLETFHALSNYGIPRNIMGKIYKEAREVFGYGSVLLSKKFRAYENLGLSKSTVIKLVSSCPELLLGDLNSEFAMVLDWLKKIGIENDWMGKYLSYERTYDWERMLDTIEFFDKVGYSGKHMLNLFKTSPALLFEGCGKMVYVLFGRLFKSGLKTNVIHSSFIQNPCLMSNKCSKNLLKVVDFLYDIGMGSEAIAHIMSNHMQLLSAHSLKGPKTVCRVLKVKKTDLCQIISDDPLKLISLASKSKQKCAKQLSQDLTNHMEKTKFLLKLGYVENSEEMEKALKKYRGRGDQLQERFDCLVAAGLDYNIVTEMIKRAPMILNQSKDIIEKKIDCLRNILGYPLESLVAFPSYLCYDLERIIQRFSMYAWLKERGAAKPMLTLSTILVSSDERFVKYFVNVHPEGPNVWEGLKNLTPST 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00274 575 Coils Coil 433 453 - -
Bva04g00274 575 Gene3D Transcription termination factor 3, mitochondrial 298 566 IPR038538 -
Bva04g00274 575 Gene3D Transcription termination factor 3, mitochondrial 97 228 IPR038538 -
Bva04g00274 575 Pfam mTERF 312 550 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 Pfam mTERF 163 291 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 52 569 - -
Bva04g00274 575 PANTHER CGI-12 PROTEIN-RELATED 52 569 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 SMART mt_12 500 533 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 SMART mt_12 212 243 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 SMART mt_12 468 499 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 SMART mt_12 177 207 IPR003690 GO:0003690|GO:0006355
Bva04g00274 575 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00274 Bva-Chr4 1689967 1693625 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva04g00274 mTERF 1.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00274 - - qsu:112016651 699.893