Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00271 ATGGAAGATTCAGAGGAAGAAGAGCTTCTGAATCTTAACCTTTCAGTTGCGGCTAAtagggagaagagaaagaagggaaagaTAATAACAAGGGATCATGCTTCTTTGAGCCCTATGATGACGAATAATTCCTATGAAGGCTATGAAGGGAAGATCTTTAGGCTACTTCAGATGAGGGAGCAGATGCTAAGACAAGATCAGCACCATAGAAGGAAAGGAGTTGTTGAAGATGGCAATGGCCTACCTTTGATCCATTTGCTTCTCACAACAGCCACTGCAGTTGATGAGAACAACTTGAGTTCTGCCTTAGAGAATCTCGCAGAACTGTATCAAACAGTTTCCTTAACAGGAGACTCAGTTCAAAGGGTGGTGGCCTATTTTGCTGATGGCTTGGCTGCTAGGCTCCTCACAAGGTCATCTCCATTCTATGACATGCTCATGGGGGAACCCACATGTGAAGAAGAGTTTCTAGCATTCACAGATCTTTATAGGGTCTCACCCTATTACCAATTTGCTCATTTCACTGCAAATCAAGCAATTCTGGAGGCTtttgagaaggaagaagagaagaacaaCAAAGCACTACATGTGATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAGAAAGCAACAAGTGGCAACAGAATATCTTTGAGAATCACAGGTTTTGGGAAGAACTTGAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGCTTCTCAAAAGGTTTTGGCAATCTTGTGTTTGAGTTCCAAGGGCTTCTAAGAGGGTCAAGGGTGATCAAtcttaggaaaaagaaaaatgaaacagtAGCAGTGAACTTGGTTTCTTATTTGAACACTTTGAGTAGTTTTATGAAGATTTCTGACACATTGGGATTTGTTCATTCCCTTAAGCCCTCCATTGTTGTGTTGGTGGAACAAGAAGGTAGCAGGAGTCCAAGGGCATTCTTGTCAAGATTCACAGACTCTTTGCACTATTTTGCAGCCATGTTTGATTCATTGGATGATTGTCTGCCATTGGAAAGCACAGAGAGGCTGAGGATTGAGAAGAAGCTGTTGGGGAAAGAGATAAAGAGCATGCTCAACTATGACATGGATGGTGGAGATTGCCCAAAATATGAGAGGATGGAAACTTGGATAGCAAGAATGGAAAGTCATGGGTTTGCAGGAACCGAGATAAGCTCAAAGTCTGTGATTCAAGCAAAATTGCTGTTGAAGATGAGAGCCCATTACTGCCCATTGCAATTTGAAGCAGAAGGAGGTTGTGGGGGATTCAAGATTTCTGAAAGAGATGAAGGAAGAGCAATCTCTTTGGGATGGCAAAATAGGTTTCTGCTTACAGTCTCTGCATGGCAACCAGTGATCTG 1397 0.4023 MEDSEEEELLNLNLSVAANREKRKKGKIITRDHASLSPMMTNNSYEGYEGKIFRLLQMREQMLRQDQHHRRKGVVEDGNGLPLIHLLLTTATAVDENNLSSALENLAELYQTVSLTGDSVQRVVAYFADGLAARLLTRSSPFYDMLMGEPTCEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEKEEEKNNKALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSSFMKISDTLGFVHSLKPSIVVLVEQEGSRSPRAFLSRFTDSLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGGDCPKYERMETWIARMESHGFAGTEISSKSVIQAKLLLKMRAHYCPLQFEAEGGCGGFKISERDEGRAISLGWQNRFLLTVSAWQPVI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00271 465 Pfam GRAS domain family 83 462 IPR005202 -
Bva04g00271 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 462 IPR005202 -
Bva04g00271 465 PANTHER OSJNBA0084A10.13 PROTEIN 7 462 - -
Bva04g00271 465 ProSiteProfiles GRAS family profile. 74 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00271 Bva-Chr4 1675668 1677065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00271 64 463 GRAS Transcription Factor Family AT3G54220 35.749 5.68e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva04g00271 GRAS 1.5e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00271 - - gmx:100813979 761.14