Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00248 ATGACTGTGGTGTCGGGTTCTTCACGGAAGAGTTTCAGGAAGAGGAACGCCATGCTGCCGGGGTTTCGCTTCCATCCCACTGATGAAGAGCTGGTTCTGTattatttgaagaagaaaatacgTGGGAAGAAGCTGAGGCAAAATATTATTGCCGAGACTGACGTATACAAGTGGAATCCTGAGGAGTTGCCTGGGCAGTCTGTACTCCAAACTGGAGATAGGCAGTGGTTCTTTTTCAGCCCTAGAGATAGGAAGTATCCCAATGGTGCAAGGTCCAATCGAGCAACTAGACAAGGATACTGGAAAGCAACAGGAAAGGATCGTAACGTGACATACCATTCTCGAACAGTTGGAGTGAAAAAGACACTGGTTTTCTATAAAGGAAGAGCACCTAATGGTGAGCGGACTGACTGGGTTATGCATGAATACACCTTAGATGAAGAAGAACTTAAAAGATGTGAAGGAGTTGAGGAGTATTTTGCACTTTACAAGCTATTCAAGAAGAGCGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTAAAGAAGAAGAGTGGGAGGATGATGATTTTGTAGAACTCAATGACACTTTAGTTGATGATGAGGAGGCTCTGACTCTTACCCAGCAACCTCACGAGGTGTTTACTTCTATTGATTCCATCACTGTTAATGAAGTTCAGCCTTCAATTGATGATGACACTCTTGAGCTCATAAGAAGAATTTTGGATGATGAGCCTATCCATGACCAGCTACAGGAGACTGGTTGTCTTCCAGCATTAGCTCAGGCTTTTGCTGGAGCATCACAAACTGCCATGGTTGATCAATTCTTTGCTGAGCCCACTGCAACATTTCACCCCAGCACTGAGCAATTTTATTTACAGCCGATCTCTGACATCACTCAGTCGGCCATATCTCATGTGCACGTATCTGAAGCACCTGAAGTCACCTCTGCGCCCAAAGATCAAGAAGAGTTGCCTCTCCTTCATGAGGGAGACTTTCTGGAAATTAATGATCTCCTTGAACCTGAACTGACCTTTTCAAACGTGGACAAACCATTGGACAACCTGCAGTTTGAAGATGGATCAAGTGAATTTGACCTGTTTCATGATGCATCTATGTTTATCCAAGACATAGGGCCAATTGATCAAGAAAATGTTCCACTTCCAGATATGAATGTCCTTGGGGGAAATCAGGATTATCAGTTGCTACCCTATCCAGAGGATGCAACTCAGACTGGTGGTGAATTTTGGATCCATGCTCAGGGAAATGACATCTTGGCTTTACCAGAGCAATCTGATGTTACTTTCTCTCTACCAACACCAGGTGTGGTATGTGATTCTGCCATTGTTACTGCCGGAggcaatcaaaatcaaaataggtCTGCGGAAGATGTGGCTACAAGTAGCTTCAGTTCTGCTCTGTGGTCATTTGTGGATTCGATACCCACCACTCCTGCATCAGCTTGTGAAGCTGTTTTGGCGAATCGGGCATTCGAACGAGTGTCTAGCTTCAGAAGGATGAAATTTAACGCCAAAAACACAAGTGTTGCTGCAGGTAATAATACTGGGACTAAAAAGACAGCAGGCAGGACTGGAgcgtttttccttttcttatcaGTTATTGTTGCTTTATGTGCTTTCTTGTGGGCTTCTATGGGAACTTTGAAACCATTAGGGAGATGGAACTCTTGGTA 1700 0.4294 MTVVSGSSRKSFRKRNAMLPGFRFHPTDEELVLYYLKKKIRGKKLRQNIIAETDVYKWNPEELPGQSVLQTGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRNVTYHSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEEELKRCEGVEEYFALYKLFKKSGPGPKNGEQYGAPFKEEEWEDDDFVELNDTLVDDEEALTLTQQPHEVFTSIDSITVNEVQPSIDDDTLELIRRILDDEPIHDQLQETGCLPALAQAFAGASQTAMVDQFFAEPTATFHPSTEQFYLQPISDITQSAISHVHVSEAPEVTSAPKDQEELPLLHEGDFLEINDLLEPELTFSNVDKPLDNLQFEDGSSEFDLFHDASMFIQDIGPIDQENVPLPDMNVLGGNQDYQLLPYPEDATQTGGEFWIHAQGNDILALPEQSDVTFSLPTPGVVCDSAIVTAGGNQNQNRSAEDVATSSFSSALWSFVDSIPTTPASACEAVLANRAFERVSSFRRMKFNAKNTSVAAGNNTGTKKTAGRTGAFFLFLSVIVALCAFLWASMGTLKPLGRWNSW 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00248 566 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Bva04g00248 566 SUPERFAMILY NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Bva04g00248 566 PANTHER NAC TRANSCRIPTION FACTORS 2 3 562 - -
Bva04g00248 566 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 562 - -
Bva04g00248 566 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Bva04g00248 566 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00248 Bva-Chr4 1522896 1526530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00248 20 562 NAC Transcription Factor Family AT1G34190 44.618 1.13e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00248 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00248 - - gmx:100794925 591.652