Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00238 ATGGCGTTGCAATCTCACATAGAGAAAATTCTATGGCCtgaggaccaaatctctgcaCGCATCTCCGAGGTTGGCGCCCAAATCACCGACGAGTTTCGCGCCATTTCACCGCCGCCGGTCGTGGTCGGCGTGGCCACTGGTGCCTTCCTATTTTTGGCGGACCTGGTTCGCAAAATTGACCTCCCCATCTCCGTTGATTTCGTTCGCGCCGAATCCTACGGTTCAGGAACCGAGTCCAATGGCGCCCCCACCATTTCCTGCGATTTGAAGGTTGACGTGAAGAACCGACACGTAATTGTGGTTGAAGACATTGTAGACACAGGGCACACTCTATCTTGTATCATTGCTGACTTGACGTCAAAAGGAGCCTCCTCTGTCTCTGTGTGCACTTTTCTTGATAAACCGGCAAGAAGAAAGGTTCATTTTCAATTGGTTGGTGAAGGGAAGTTCTACCGTTGTTTTGAGTGTCCAAACTATTTTGTTGTTGGTTATGGCATGGATTTCAATGAACTGTATAGGAACTTGCCTTATGTTGGTGTCTTGAAGCCTGAACATTACTA 560 0.4679 MALQSHIEKILWPEDQISARISEVGAQITDEFRAISPPPVVVGVATGAFLFLADLVRKIDLPISVDFVRAESYGSGTESNGAPTISCDLKVDVKNRHVIVVEDIVDTGHTLSCIIADLTSKGASSVSVCTFLDKPARRKVHFQLVGEGKFYRCFECPNYFVVGYGMDFNELYRNLPYVGVLKPEHY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00238 186 Pfam Phosphoribosyl transferase domain 20 168 IPR000836 -
Bva04g00238 186 SUPERFAMILY PRTase-like 3 186 IPR029057 -
Bva04g00238 186 CDD PRTases_typeI 24 139 IPR000836 -
Bva04g00238 186 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Bva04g00238 186 Gene3D - 1 186 IPR029057 -
Bva04g00238 186 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Bva04g00238 186 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00238 Bva-Chr4 1472999 1475134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00238 1 186 PRT Gene Family AT1G71750 61.929 4.16e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00238 K00760 - gmx:100037484 299.671