Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00217 ATGGATCACACTCTCCAACTGGTCCTCGCCGGAACGGCAAGCTTCTTCGTCGTTATCCTTATCTTCGCCGCAATAATCCTTGCCTGcagaagaaatatgaaaatccACCGGACCCGACCTGCAACCAATCCGGACATATCATCCATCACCGTAGATGCGAGTTGGTCCTCCGACCCGCAACTTCAGATATCCAAAACCGAGCTCGCCGCCTCAACCAACAACTTCTCTCCGGATCTGGTCATCGACTACGACAGCTTCGGCATCGTCTACAAGGCCAGCCTCTCGAATGGCACGACGGTGGCGATTAAGAAACTGTCGCCGCATGCTTTCCAAGGATTTCGTGAATTCCGAGAAGAAACGGAAACAATAGGTGAACTCCGGCACCAAAATATCGTCAAAATCCTCGGCTACTATGCATCTTCAGGTTCTGAGACCGAGAGGTTGATAGTCTACGAGTTCCCGGAGAGAGGTAGCCTTGACCAATGGTTGCACGACTTGTCATCACCAATGAACGACGTCGTTCAGGACGTGCGTTTACCGTTATCTTGGGAAACGAGGATTAAGATAATTCATGGCGTGGCAAATGGGCTCTGTTACTTGCATCAACTGGATGAGCCCATTATTCATGGAGACATAAGGGCTAGTAGTGTGTTATTGGGCTCAAACTTTGAGGCCCATATTGCTGGTTTTGGGCAAGCAAGAAGTTTTGAGTTGCCTCATACTCAAGTGTCCACGCAATTGGGGTACACGTCACCAGAGTACAGAGATGGGCTCAATTGGGCCAATGTTAAGGTAGATGTATATAGCTTTGGGGTTTTGATGTTGGCAACTGCCACGGGCTATCGGCCCAATAGGCCATTGAAGTGGAATAACAATAAGGTCGGGTTAGTGGAATGGGCCGGGAAAATGACGGCCCAAAATGATGAAATGCGTATGATTGATTCCGCTATTCCAAAAGACGAGTTGAGTGAAGATAGTGTGAAGGCGTATTTTGAGACTGCTGGTTTGTGCACTAGTGAGCTGCAGAAAGATAGGCCGGAAATGGCAGAGGTGCTGAAAATGTTGGGTGCAATGCCAATGATTAGTTA 1088 0.4789 MDHTLQLVLAGTASFFVVILIFAAIILACRRNMKIHRTRPATNPDISSITVDASWSSDPQLQISKTELAASTNNFSPDLVIDYDSFGIVYKASLSNGTTVAIKKLSPHAFQGFREFREETETIGELRHQNIVKILGYYASSGSETERLIVYEFPERGSLDQWLHDLSSPMNDVVQDVRLPLSWETRIKIIHGVANGLCYLHQLDEPIIHGDIRASSVLLGSNFEAHIAGFGQARSFELPHTQVSTQLGYTSPEYRDGLNWANVKVDVYSFGVLMLATATGYRPNRPLKWNNNKVGLVEWAGKMTAQNDEMRMIDSAIPKDELSEDSVKAYFETAGLCTSELQKDRPEMAEVLKMLGAMPMIS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00217 362 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00217 362 SUPERFAMILY Protein kinase-like (PK-like) 56 355 IPR011009 -
Bva04g00217 362 Gene3D Transferase(Phosphotransferase) domain 1 155 360 - -
Bva04g00217 362 PANTHER OS01G0253100 PROTEIN 1 356 IPR045271 GO:0004714|GO:0006468
Bva04g00217 362 Gene3D Phosphorylase Kinase; domain 1 40 153 - -
Bva04g00217 362 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 356 - -
Bva04g00217 362 Pfam Protein tyrosine and serine/threonine kinase 85 354 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00217 Bva-Chr4 1346608 1347696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00217 49 355 Receptor kinase-like Gene Family AT5G07280 37.821 9.92e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva04g00217 PK_Tyr_Ser-Thr 2.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00217 - - lang:109335579 397.512